Pairwise Alignments

Query, 464 a.a., MFS transporter from Pseudomonas simiae WCS417

Subject, 449 a.a., arabinose efflux permease family protein from Dechlorosoma suillum PS

 Score =  360 bits (923), Expect = e-104
 Identities = 197/393 (50%), Positives = 259/393 (65%), Gaps = 5/393 (1%)

Query: 4   PHSERMSSGETRAASGLALVFAFRMLGMFMVLPVLATYGMDL-AGATPALIGLAIGAYGL 62
           P  + M+  E RA + LA +FA RMLG+F++LPV A Y   L +G    L+GLAIG YG 
Sbjct: 53  PAGDAMTPEERRAGASLASIFALRMLGLFLILPVFAVYAHTLPSGDNGLLVGLAIGIYGA 112

Query: 63  TQAIFQIPFGIISDRIGRRPVIYLGLIVFALGSVLAAQSDSIWGVIAGRILQGAGAISAA 122
           TQA+FQIP+GI SDR GR+PVI  GL++FALGS +AA +D +  +IAGR+LQGAGAISAA
Sbjct: 113 TQALFQIPYGIASDRFGRKPVIVFGLLLFALGSFIAAAADDLPMIIAGRVLQGAGAISAA 172

Query: 123 VMALLSDLTREQHRTKAMAMIGMTIGLSFAVAMVVGPLLTRAFGLHGLFLATGGMALFGI 182
           V AL +DLTREQHRTK MAMIG +IGL FA+++V  PLL  A G+ G+F  TGG+AL  I
Sbjct: 173 VTALAADLTREQHRTKVMAMIGSSIGLVFALSLVAAPLLYAAIGMAGIFALTGGLALLAI 232

Query: 183 VIVAFMVPRSTGTLQHRESGVARKALLPTLKHPDLLRLDLGIFVLHAMLMCSFVALPLAL 242
           V +  +VP +   L   + G  R A    L HP LLRL+ G+FVLH      +V +P AL
Sbjct: 233 VALYKVVPPAPKVLV--DGGRTRFA--DVLFHPQLLRLNFGVFVLHLTQTAMWVLIPAAL 288

Query: 243 VEKAGLPKEQHWWVYLTALLISFFAMIPFIIYGEKKRKMKRILLGAVTTLMLTELFFWQF 302
           V+   LP  +HW VYL A+L+SF  M+P +I  EK  +MK +  GAV  L+L +  F  F
Sbjct: 289 VKTGDLPLAEHWKVYLPAVLVSFAFMVPAVIAAEKYGRMKMVFNGAVVLLLLVQAGFGLF 348

Query: 303 GDSLRALVIGTVVFFTAFNLLEASLPSLISKVSPAGGKGTAMGVYSTSQFLGSALGGIMG 362
           G  L  L +    FF AFN+LEA+ PSLIS+++P   KG A+G+Y+T+Q LG  LGG +G
Sbjct: 349 GQGLWPLALLLTAFFVAFNILEATQPSLISRIAPVEAKGAALGIYNTTQSLGLFLGGAVG 408

Query: 363 GWMFQHGGLSVVFLGCAGLAALWLAFAVTMREP 395
           G + Q  G   V+     L+ +WLA  +TM+ P
Sbjct: 409 GMLAQRLGGDAVWWCTGILSLVWLALGLTMKPP 441