Pairwise Alignments

Query, 464 a.a., MFS transporter from Pseudomonas simiae WCS417

Subject, 455 a.a., transporter, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  376 bits (965), Expect = e-109
 Identities = 198/435 (45%), Positives = 284/435 (65%), Gaps = 2/435 (0%)

Query: 9   MSSGETRAASGLALVFAFRMLGMFMVLPVLATYGMDLAGATPALIGLAIGAYGLTQAIFQ 68
           +S  E + A  LA VF  RM+G+FM++PV A YG  L G +P  +G+AIGAYGLTQA+ Q
Sbjct: 6   LSGTEKKVAFSLASVFGLRMMGLFMIMPVFALYGQHLEGFSPLWVGIAIGAYGLTQAVLQ 65

Query: 69  IPFGIISDRIGRRPVIYLGLIVFALGSVLAAQSDSIWGVIAGRILQGAGAISAAVMALLS 128
           IP GI+SD+ GR+PVI  GL+VFA+GSV+AA +++I+GV+ GR +QG GAI+AAV+AL +
Sbjct: 66  IPMGILSDKYGRKPVILAGLVVFAIGSVIAANAETIYGVVFGRAVQGMGAIAAAVLALAA 125

Query: 129 DLTREQHRTKAMAMIGMTIGLSFAVAMVVGPLLTRAFGLHGLFLATGGMALFGIVIVAFM 188
           DLTR++ RTK MA+IGM IGLSFA+++++GP++ +  GL GLF  T  +A+ G++++ F+
Sbjct: 126 DLTRDEQRTKVMAIIGMCIGLSFALSLLMGPIVAQHLGLTGLFWLTALLAILGMLLIQFL 185

Query: 189 VPRSTGTLQHRESGVARKALLPTLKHPDLLRLDLGIFVLHAMLMCSFVALPLALVEKAGL 248
           VP         ++      L      P L RL+ GIF+LH +L   FVALPL LV+ AGL
Sbjct: 186 VPNPITQAPKGDTLATPAKLKRMFFEPQLFRLNAGIFILHLVLTAVFVALPLDLVD-AGL 244

Query: 249 PKEQHWWVYLTALLISFFAMIPFIIYGEKKRKMKRILLGAVTTLMLTELFFWQFGDSLRA 308
            KE+HW +Y  A + +FF M+P II G K++  K +   A+  +M        F  +L  
Sbjct: 245 VKEKHWMLYFPAFVGAFFLMVPLIIIGVKRKNTKAMFQIALVIMMFALAAMAIFASNLWV 304

Query: 309 LVIGTVVFFTAFNLLEASLPSLISKVSPAGGKGTAMGVYSTSQFLGSALGGIMGGWMFQH 368
           L +  ++FFT FN LEASLPSLI+K  P G KG+AMGVYSTSQFLG+  GG++GG  FQ 
Sbjct: 305 LSVAVLLFFTGFNYLEASLPSLIAKFCPVGEKGSAMGVYSTSQFLGAFCGGMLGGGAFQL 364

Query: 369 GGLSVVFLGCAGLAALWLAFAVTMREPPYVTSLRLPLSPEAIRES-GLVERLKAVVGVTD 427
            G   VF+    L  +WL   + M+ P  + S  L  + +   ++  +  +L  ++GV +
Sbjct: 365 VGAVGVFIVALVLMGIWLLLTLGMKNPVLLKSYTLEAAVKDKNQARDMAAQLSQLMGVVE 424

Query: 428 AVVVAEEAAIYIKLD 442
           A+VV +E   Y+K+D
Sbjct: 425 AIVVLDEKVAYLKVD 439