Pairwise Alignments

Query, 171 a.a., single-stranded DNA-binding protein from Pseudomonas simiae WCS417

Subject, 220 a.a., single-strand binding protein (RefSeq) from Shewanella loihica PV-4

 Score =  163 bits (413), Expect = 2e-45
 Identities = 106/223 (47%), Positives = 128/223 (57%), Gaps = 58/223 (26%)

Query: 2   ARGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTEWHRVSMFG 61
           +RGVNKVILVG  G+DPEVRY+PNGNAV N ++ATSE W D+Q GQ  E+TEWH + M+ 
Sbjct: 3   SRGVNKVILVGNLGKDPEVRYMPNGNAVANFTVATSESWKDQQ-GQMQERTEWHNIVMYR 61

Query: 62  KVAEIAGEYLRKGSQVYIEGKLQTREW--EKDGIKRYTTEIVVDMQGTMQLLGGRPQGDQ 119
           ++AEIAGEYL+KGS+VY+EGKLQT +W  ++ G  RY TEI V+    MQ+L  R QG Q
Sbjct: 62  RLAEIAGEYLKKGSKVYLEGKLQTSKWQDQQTGQDRYKTEINVN---EMQMLDSRGQG-Q 117

Query: 120 QGQGGMSN-SAPR------PQQSRP-------------------------------QPSQ 141
            GQGG     AP+      PQQS P                               QP Q
Sbjct: 118 GGQGGQQGYGAPQQQNQYAPQQSAPAARPQQPQHSAPQGGYGAQQQAAPQQQGYGAQPQQ 177

Query: 142 QPQRESRP--APQQAAPQ--PAPD---------FDSFDDDIPF 171
            P    +P  APQQ APQ  PAP           D +DDDIPF
Sbjct: 178 APAYAPKPQAAPQQQAPQQRPAPQPQQNFTPDLDDGWDDDIPF 220