Pairwise Alignments

Query, 521 a.a., iron ABC transporter permease from Pseudomonas simiae WCS417

Subject, 542 a.a., iron(III) ABC transporter, permease protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  201 bits (511), Expect = 6e-56
 Identities = 164/542 (30%), Positives = 255/542 (47%), Gaps = 54/542 (9%)

Query: 21  PSIWLLLPVLFLVGLSLLPL-AYVGLKAWQAG--WAEAVHLLWRPYVFGLLRNTLALMVG 77
           P  W  L   F+  L L PL A +   A+  G  +A     +   Y+     NTL LM+G
Sbjct: 6   PKRWSFLG-FFIAFLFLTPLLALLATAAFPDGEVFAHLADTVLPTYIL----NTLLLMLG 60

Query: 78  VTVTCAVIGLSLAWLLERSNLPGRRIWGVILCLPFAVPAFVSSFTWVSLS---------- 127
           V +  A++ +  AWL+ R  +PGRR +   L LP A+PA+V ++ +  L           
Sbjct: 61  VGLLSALLAIPAAWLVARCEVPGRRFFQWALLLPLAMPAYVVAYVYTDLLDYPGPIQRAV 120

Query: 128 --------------ASFEGLGGAILVMSLSKYPLVFLPVAATLRNLDPSLEESARTLGLN 173
                              LGGA L+++   +P +FL           SL +++R +G +
Sbjct: 121 RALLGIDAGADYWFPDIRSLGGATLILAFVLFPYIFLLARTAFMEQSLSLLQASRLMGAS 180

Query: 174 RWGVFFRITLPLLWPSLLAGALLIALHMLVEFGALSIIGLQTFTTAIYQQFELEFSNANA 233
               F+R+ LP+  P++ AG  L+A+    +F  +S   + T TTA+Y  +    S A+A
Sbjct: 181 ERESFWRLALPMARPAIAAGVALVAMETAADFATVSYFAVPTLTTAVYDTWLGYGSLASA 240

Query: 234 AMLSAVLLVMCLTLLWLELRVRGKGRHVRIGQGAARHAEQVRLGQWAPLGQGYCLALAII 293
           + LS ++LV    L+WLE R   + + +   Q       ++RLG+W  LG GYC  L  +
Sbjct: 241 SKLSMIILVAVFLLIWLE-RFARRRQQLFQRQALTGQIPRLRLGRWRWLGLGYCSLLLFL 299

Query: 294 GSGIPLG-MLGYWLAVGSSAAFPVAEIGEALLSSLALSLAGAALCLVLAVPVGLLVVRYK 352
              +PL  +LGY  AV         +      SS +LS   A LC+V A+ V L + R  
Sbjct: 300 SFLLPLAILLGY--AVRYFDLSWQGDFWRYSWSSFSLSAIAAVLCVVFAL-VLLFIARIS 356

Query: 353 GRLA-IWAERLPYLLHALPGLVIA------LTLVYFALHYV--------PALYQTSA--L 395
            R       RL    +ALPG V+A      LT + F L+          P L  T +   
Sbjct: 357 PRAQDAMPARLASTGYALPGTVLAIGVLGPLTWLDFGLNDFCAWLGIDGPGLLFTGSTIA 416

Query: 396 LLIAYALLFLPLAQAPIRTALNKAAPQLEDAARTLGASSFSAFCRVTLPIIFPALGAAFA 455
           L+ A+ + F+ +A   I  +  + +P L+ AA ++G      F +V LP++   + A+  
Sbjct: 417 LIFAFCVRFIAIAIGGIENSWRRLSPSLDMAALSMGRGPVGLFFKVHLPLLRTGILASLL 476

Query: 456 LVFLDAMKELTATLLLSPTGLNTLATAVWAHTSNVEFAAAAPYAALLILVSGLPVYVLTT 515
           LVF++AMKEL A LLL P G   LAT V+ + S+      A  A +++LV  +P+  L  
Sbjct: 477 LVFIEAMKELPAALLLRPIGFENLATKVFEYVSDERLEQGALGAIVIVLVGLIPLVFLNR 536

Query: 516 RI 517
            I
Sbjct: 537 SI 538