Pairwise Alignments

Query, 521 a.a., iron ABC transporter permease from Pseudomonas simiae WCS417

Subject, 543 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Shewanella loihica PV-4

 Score =  194 bits (493), Expect = 7e-54
 Identities = 158/548 (28%), Positives = 259/548 (47%), Gaps = 63/548 (11%)

Query: 21  PSIWLLLPVLFLVGLSLLPLAYVGLKAWQAGWAEAVHLLWR---PYVFGLLRNTLALMVG 77
           P  W  L  L  +  +L PL  + ++A     A   HL+      Y+F    NTLALM+ 
Sbjct: 6   PKSWSTLSYLTAICFAL-PLGAICIQAMVPDEAVFGHLMQTVLPTYIF----NTLALMLF 60

Query: 78  VTVTCAVIGLSLAWLLERSNLPGRRIWGVILCLPFAVPAFVSSFTWVSLS---------- 127
           V++   +I +  AW + R + PGR  +   L LP A+PA+V ++ +  L           
Sbjct: 61  VSLGALLIAVPAAWCVARCDFPGRNGFQWALLLPLAMPAYVVAYVYTDLLDYAGPIQTWL 120

Query: 128 --------------ASFEGLGGAILVMSLSKYPLVFLPVAATLRNLDPSLEESARTLGLN 173
                              LGGA ++++L  +P ++L          PSL  ++R +G  
Sbjct: 121 RQVNGWLSPTDYYFPDVRTLGGASVMLALVLFPYIYLLARTAFMEQSPSLLHASRVMGAG 180

Query: 174 RWGVFFRITLPLLWPSLLAGALLIALHMLVEFGALSIIGLQTFTTAIYQQFELEFSNANA 233
            W  F+R+ LP+  P+L  GA L+A+    +F  +S   + T TTA+Y  +    S A A
Sbjct: 181 PWRSFWRLNLPMARPALAVGAALVAMETAADFATVSYFAVPTLTTAVYDTWLGYGSLAAA 240

Query: 234 AMLSAVLLVMCLTLLWLELRVRGKGRHVRIGQGAARHAEQVRLGQWAPLGQGYCLALAII 293
           A LSA++L++   L+  E   R K +  +       H      G  A L  GYC  L ++
Sbjct: 241 AKLSAIILLVVFCLIGAERFARRKQQLFQKQTPITSHERYALSGVKAWLAAGYCAVLLLL 300

Query: 294 GSGIPLG-MLGY---WLAVGSSAAFPVAEIGEALLSSLALSLAGAALCLVLAVPVGLLVV 349
             G+P+  +LGY   +  V  + AF      E  L+SL ++L  + + +V A+ +  +  
Sbjct: 301 AFGLPVWVLLGYAWDYFDVSWNQAF-----WEYSLNSLIIALVVSLVTVVFALLLMFVRR 355

Query: 350 RYKGRLAIWAERLPYLLHALPGLVIA------LTLVYFALHYVPALYQTSA--------- 394
               ++ I   RL    +ALPG V+A      L+L+ FA++ + A +  S          
Sbjct: 356 CSPRKIDILPSRLASTGYALPGTVLAIGVLVPLSLLDFAVNDLYAYFDQSGPGLIFSGTL 415

Query: 395 -LLLIAYALLFLPLAQAPIRTALNKAAPQLEDAARTLGASSFSAFCRVTLPIIFPALGAA 453
            +L+ A+A+ F  +A   I  +  + +P L+ A+ T+G    +   R+ LP++   + AA
Sbjct: 416 FVLIFAFAIRFAAIAIGSIENSYKQISPSLDMASVTMGMRPSAILSRIHLPLLRSGIFAA 475

Query: 454 FALVFLDAMKELTATLLLSPTGLNTLATAVWAHTSNVEFAAAAPYAALLILVSGLPVYVL 513
             LVF++ MKEL A LLL P G   LAT V+   S+ +    A  A +++LV  +P+   
Sbjct: 476 ILLVFIECMKELPAALLLRPVGFENLATYVYQFVSDEQLEQGALGAIVIVLVGLIPL--- 532

Query: 514 TTRIYLSR 521
              IYL+R
Sbjct: 533 ---IYLNR 537