Pairwise Alignments

Query, 319 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 332 a.a., Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Pseudomonas stutzeri RCH2

 Score =  363 bits (931), Expect = e-105
 Identities = 177/316 (56%), Positives = 233/316 (73%), Gaps = 1/316 (0%)

Query: 4   VELGVLIYQGAQLAAVHGLTDLFGVANRIAAEHQSAQLPLLRVSHWQV-DVTGKPARVFS 62
           +E+G+L+Y GAQLAAV+GLTDLF VANR+AAE  +A+LP LRV+HW + D T    RVF 
Sbjct: 8   LEIGLLLYPGAQLAAVYGLTDLFSVANRMAAERGAAKLPTLRVTHWSLQDGTSGIQRVFD 67

Query: 63  SHPGPEQPMMAVLVPPSIGEFTEDQAPLALLEWIRQQHAAGTVLGGVCIGSIMLARSGLL 122
           S PG ++    +++PP +    E         W+ Q H AG  LG VC G+ +LA +GLL
Sbjct: 68  SLPGSQRSPRIIILPPCLEARPEAHVIQPFAAWLGQCHQAGVTLGSVCAGAFLLAETGLL 127

Query: 123 DGRSATTHWSSAKSFAARYPAVRLEADKPIVDDGDLITTAGLMAWSELGLRLVDRLMGPS 182
           DGR+ TTHW  A++   R+P V+++AD+ IVDDGD+IT  GLMAW++LGL LV+RL+GP+
Sbjct: 128 DGRTVTTHWGLAQALRERFPNVQVDADRMIVDDGDIITAGGLMAWTDLGLALVERLLGPT 187

Query: 183 IAADTARFLVIEHSDSASQCGSNFAPILGHGDAAILKVQHWLQASGAVDVSLAAMAREAG 242
           IA++TAR+LVI+ +  + +  S+FAP L HGD A+L+VQ WLQ+  A  V +AAMA +AG
Sbjct: 188 IASETARYLVIDLTRQSQRYFSSFAPRLDHGDEAVLRVQRWLQSQSASAVPVAAMAAQAG 247

Query: 243 LEERTFLRRFRNATGLKPTEYCQHLRVGKARQMLEFTNGTIDHIAWTVGYQDPSAFRATF 302
           + ERTFLRRFR ATGLKPTEYCQ LRVGKAR++LE TN  I+ +AW VGYQDP AFR  F
Sbjct: 248 MGERTFLRRFRAATGLKPTEYCQQLRVGKARELLELTNRGIEQVAWAVGYQDPGAFRKVF 307

Query: 303 KKITGLAPSDYRSRFG 318
           +++ GL+P DYR RFG
Sbjct: 308 QRLVGLSPGDYRRRFG 323