Pairwise Alignments

Query, 319 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 319 a.a., transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Dechlorosoma suillum PS

 Score =  137 bits (344), Expect = 4e-37
 Identities = 87/246 (35%), Positives = 133/246 (54%), Gaps = 2/246 (0%)

Query: 74  VLVPPSIGEFTEDQAPLALLEWIRQQHAAGTVLGGVCIGSIMLARSGLLDGRSATTHWSS 133
           V++ PS  +  E + P A+L+ +   H  G  + G+C+G+ +LA +GLLDGR ATTHW  
Sbjct: 70  VVIVPSWRDPAE-RPPQAVLDALVAAHRRGAQVVGLCLGAYVLAEAGLLDGRRATTHWEF 128

Query: 134 AKSFAARYPAVRLEADKPIVDDGDLITTAGLMAWSELGLRLVDRLMGPSIAADTARFLVI 193
           A  FA RYPAV L+     VD+G+L+T+AG  A  +  L L+ +  G + A   AR LV 
Sbjct: 129 AADFARRYPAVTLDPGVLYVDEGNLLTSAGTAAGIDACLHLLRQRCGATAANRVARRLVT 188

Query: 194 EHSDSASQCGSNFAPI-LGHGDAAILKVQHWLQASGAVDVSLAAMAREAGLEERTFLRRF 252
                  Q      P+    GD+ +  +   ++AS      L ++A +A +  RTF R F
Sbjct: 189 PPHRQGGQAQYIPQPLPASAGDSRLAALLDRVRASLEQPHDLNSLAAQALMSRRTFTRHF 248

Query: 253 RNATGLKPTEYCQHLRVGKARQMLEFTNGTIDHIAWTVGYQDPSAFRATFKKITGLAPSD 312
           R  TG    ++    R+G A+++LE T+  I+ IA   G+  P A R  F++  G++PS 
Sbjct: 249 RQLTGATVGQWLLGERLGLAQRLLESTDHGIERIAQLAGFGSPEALRLHFRRSLGVSPSQ 308

Query: 313 YRSRFG 318
           +R  FG
Sbjct: 309 WRQSFG 314