Pairwise Alignments

Query, 315 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 880 a.a., hypothetical protein from Pseudomonas fluorescens FW300-N2E3

 Score =  103 bits (258), Expect = 1e-26
 Identities = 89/313 (28%), Positives = 150/313 (47%), Gaps = 21/313 (6%)

Query: 9   RWKKPLTIAFFLVLIVLFTLLARRIDWSEVVQTLGD--FKVRTLVIAGAL--TLCSFLVY 64
           ++++P+ +A  L+L  +  +  R +     +  L D   +V    + GAL  T+  F++ 
Sbjct: 31  KYRQPIGLAVTLLLFAIALIACRHLLSELDLYALHDSILEVPKPALLGALAATIAGFIIL 90

Query: 65  ASFDLIGRTYIRQNLVWKQILPVGIISYAFN--LNLSAWVGGIAMRYRLYSRLGVSTSNI 122
             ++     Y   NL  + ++  G  ++A    + LS   GG ++RYRLY+R G+  S +
Sbjct: 91  LGYEWSATRYAGVNLPPRTMILGGFTAFAIGNAIGLSLLSGG-SVRYRLYARHGLGASEV 149

Query: 123 AKILGLSLATNWFGYMAIAGVVFSSGLVTMPPGWKVSTTALQGIG-ALLVLASLGYLLAC 181
           A +   +  +       +A +   S L        VS   L  I  A+L+L S+   LA 
Sbjct: 150 AHMTLFASLSLGCALPPLAALATLSNLPAASIALHVSQPLLGAIAIAVLLLCSV---LAI 206

Query: 182 QFSKKRA----------WTIRGMEINLPSVRMACLQLMLGALNWSLMAAVIFTLLPAKLD 231
              ++R             I    + LP  R+  LQL++ AL+ +  A V++ LLP    
Sbjct: 207 GLYRRRLPEQPYTDNLLVRIGRRTLRLPGRRLTFLQLVITALDVAAAATVLYLLLPEAPP 266

Query: 232 YPLVLGVLLISAIAGVLTHIPAGLGVLEAVFIALLQHEASRGSLLAGLIAYRAIYFIVPL 291
           +   L V L++  AGVL+H+P G+GV EA+ +A    +     L A L+ YR IY ++PL
Sbjct: 267 FGAFLLVYLLALAAGVLSHVPGGVGVFEAILLAAFADKLGAAPLAAALLLYRLIYVVLPL 326

Query: 292 LIALVMYLGVEAK 304
           L A V+ L  EA+
Sbjct: 327 LAACVLLLINEAQ 339