Pairwise Alignments

Query, 315 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 850 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  132 bits (333), Expect = 2e-35
 Identities = 81/300 (27%), Positives = 157/300 (52%), Gaps = 11/300 (3%)

Query: 8   KRWKKPLTIAFFLVLIVLFTLLARRIDWSEVVQTLGDFKVRTLVIAGALTLCSFLVYASF 67
           +R +  +++  F V ++L   L +    ++++  +  F    L +A ALT+ S+L+   +
Sbjct: 3   RRIRVIISLLIFTVSLLLLYNLEQDYQLNDILAEVKLFSFSQLALAVALTVTSYLMLTLY 62

Query: 68  DLIGRTYIRQNLVWKQILPVGIISYAFNLNLS-AWVGGIAMRYRLYSRLGVSTSNIAKIL 126
           D +    +  +L ++++ PV  +++ F+  +  + + G ++RY+ YS LG++ + I +I+
Sbjct: 63  DYLAIKQLGSSLSYQKVAPVSFLAFTFSNTIGFSLLTGTSIRYKFYSELGLTGNQITQIV 122

Query: 127 GLSLATNWFGYMAIAGVVF----SSGLVTMP-PGWKVSTTALQGIGALLVLASLGYLLAC 181
                T + G+  I G+      +  L  +P P W  S + + G+  L++L  +GY L  
Sbjct: 123 LACSVTFFLGFFFICGIALINFPAQQLADLPLPTWLFSLSRVFGV--LMLLGVVGYFLFS 180

Query: 182 QFSKKRAWTIRGMEINLPSVRMACLQLMLGALNWSLMAAVIFTLLPAK--LDYPLVLGVL 239
              KK  +  RG E   P +  +  Q ++  L+W ++  + ++LLPA   L Y  VL + 
Sbjct: 181 LLRKKPIY-FRGFEFAPPVLSQSLKQFVVSTLDWLVVGTLFYSLLPAVDGLSYLQVLSIF 239

Query: 240 LISAIAGVLTHIPAGLGVLEAVFIALLQHEASRGSLLAGLIAYRAIYFIVPLLIALVMYL 299
            ++   GVL H+P G+GV E+V    L        +L  +I YR IY+IVP ++AL+ ++
Sbjct: 240 FVANAIGVLAHVPGGIGVFESVVTVTLSQYLPVEQILGSVIVYRVIYYIVPFMLALIYFV 299