Pairwise Alignments

Query, 644 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 561 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  201 bits (511), Expect = 7e-56
 Identities = 147/387 (37%), Positives = 215/387 (55%), Gaps = 42/387 (10%)

Query: 281 VQDAAGTLRWRI-GMGLALVGLGVLLLI-----AIVLGRRVVNRLKLLIAAMDDLAAGEG 334
           V +A    + RI  + L ++G  +LLLI     A+++   ++  L  +   +DD+A G+G
Sbjct: 192 VVEARAVFQARIDSLTLIMLGSALLLLILMAGLAVLMSNAILRPLLQIKQNLDDMAQGDG 251

Query: 335 DLTKRVQISSKDEIGDMASAVNRFVDKLQPIVRE-AGDVAQRTGVEIGAMTLRNAGADAA 393
           DLT R+ I+S+DE+G+++++ NRFV+K+  +VR+ AG   Q +G+ +GA+  +   ++ A
Sbjct: 252 DLTHRLPITSRDELGELSTSFNRFVEKIHALVRQVAGTTTQLSGL-VGAVASQAQRSEQA 310

Query: 394 AGLQR---DEVAESLRALSQMADE----AQAESHAMQAALQQVVDIRQATDENSRTSAEV 446
              QR   D+VA ++  +S  A E    AQ  + A +   QQ V  +Q  D++ R     
Sbjct: 311 MADQRSETDQVATAINEMSAAAHEVAMSAQRAAEAARETDQQGVAAKQVVDQSIRQ---- 366

Query: 447 GSLIEALAGQVQAGSQVIERLAQQSEQIEVVLTVIHGIAEQTNLLALNAAIEAARAGETG 506
              I  L G+++   + +E L Q  + I  VL VI  IAEQTNLLALNAAIEAARAGE G
Sbjct: 367 ---IHELVGELRGSGESLEGLQQDVKGIVGVLDVIRAIAEQTNLLALNAAIEAARAGEAG 423

Query: 507 RGFAVVADEVRALASKTQSSTGDIQAHIVALQQGAREAVDTIGKAG----------RQAS 556
           RGFAVVADEVRALAS+TQ STG+IQ  I  LQ      V T+ +AG           QA 
Sbjct: 424 RGFAVVADEVRALASRTQQSTGEIQGMIDRLQNATSHTVGTMLRAGEKGESTRNHANQAG 483

Query: 557 EGLLVLRDSVRLQQTVQASVEQVHAAIGLATRAAEHQAQGAHAVRGRVEVIHAQAERAAQ 616
           E L  +     L  T+ +   Q+ AA    T  AE   +  H +   V+ + + A + AQ
Sbjct: 484 ESLDAIS---ALIGTINSMNAQIAAAAEEQTAVAEEINRSVHHIADAVDGVASDAAQGAQ 540

Query: 617 AVQETTASGKVLDGLAAQLKASLGQFR 643
             +E       L+GLA QL+  +GQFR
Sbjct: 541 TARE-------LNGLAEQLQRLVGQFR 560