Pairwise Alignments

Query, 644 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  177 bits (448), Expect = 2e-48
 Identities = 113/351 (32%), Positives = 188/351 (53%), Gaps = 9/351 (2%)

Query: 299 VGLGVLLLIAIVLG---RRVVNRLKLLIAAMDDLAAGEGDLTKRVQISSKDEIGDMASAV 355
           +GLG+LL++A++      R +N L  +  A+ D+A G+GDLT+R+ + S+DE+G +A   
Sbjct: 291 IGLGILLVMALLTSWFVARQLNELGNIANALADIAEGDGDLTRRLDVRSQDEVGLLADKF 350

Query: 356 NRFVDKLQPIVREAGDV--AQRTGVEIGAMTLRNAGADAAAGLQRDEVAESLRALSQMAD 413
           N+FVD+L  +V+   +V  A   G +  A +   A        Q+DE+     A+++MA 
Sbjct: 351 NKFVDRLHQMVKNVREVSVALTQGADHAAASATQASKRIRT--QQDEITMVATAVTEMAS 408

Query: 414 E-AQAESHAMQAALQQVVDIRQATDENSRTSAEVGSLIEALAGQVQAGSQVIERLAQQSE 472
             A+  S+A   A      ++   D  ++      S I+ LA ++    ++I  L   + 
Sbjct: 409 ATAEIASNAENTAKNATQSVQLGEDGFAQMQQSKQS-IDQLAQELTGAVRIISELEVHAN 467

Query: 473 QIEVVLTVIHGIAEQTNLLALNAAIEAARAGETGRGFAVVADEVRALASKTQSSTGDIQA 532
           +I  +L+ I GIAEQTNLLALNAAIEAARAGE GRGFAVVADEVR L+ +T +ST +IQ 
Sbjct: 468 EISTILSTIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQT 527

Query: 533 HIVALQQGAREAVDTIGKAGRQASEGLLVLRDSVRLQQTVQASVEQVHAAIGLATRAAEH 592
            I  LQ+    AV  + ++ +     +  +  +    Q +  +++Q+         AAE 
Sbjct: 528 KIAGLQKVTTTAVSVMTESHKLVETSVADVNQTGASLQAISEAIQQISDMATQIASAAEE 587

Query: 593 QAQGAHAVRGRVEVIHAQAERAAQAVQETTASGKVLDGLAAQLKASLGQFR 643
           Q+     +    E +   +++ A+  Q++    K L  +A +L   + +F+
Sbjct: 588 QSLVTADINVNTESVREVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRFK 638