Pairwise Alignments

Query, 232 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 225 a.a., Outer membrane protein W from Pseudomonas stutzeri RCH2

 Score =  279 bits (713), Expect = 4e-80
 Identities = 142/233 (60%), Positives = 173/233 (74%), Gaps = 9/233 (3%)

Query: 1   MNKSLLGASLFALALVAPVVHAHEAGDILVRAGAITVNPKADSGHVKVD-QGPLAGANLG 59
           M K+L  AS  ALAL AP   A EAGDI+VRAGAITV+P+ DS  +     GPLAG    
Sbjct: 1   MRKTLFTASALALALAAPFAQAFEAGDIIVRAGAITVDPREDSSTIATAVTGPLAGT--- 57

Query: 60  GKATMSSDTQLGLNFAYMLTNHVGIELLAATPFEHDVKIKNTALGAANGKLGTLKHLPPT 119
            KAT+ SDTQLGLNFAYM+T+ VGIELLAATPF HDV +K    G  +GK G++KHLPPT
Sbjct: 58  -KATLDSDTQLGLNFAYMVTDKVGIELLAATPFSHDVGVKGLP-GNMDGKFGSIKHLPPT 115

Query: 120 LSIVYYPLDNKSAFQPYVGAGINYTWIYDEHVGSRAQGAGFSNFKAENSWGWAAQIGADY 179
           LS++YYPLD  SAFQPYVGAG+NYTW +D+ + S A+G GF+    ++SWG AAQ+G DY
Sbjct: 116 LSVIYYPLDKTSAFQPYVGAGVNYTWFFDDKLSSHAEGNGFNGLDLKDSWGLAAQVGMDY 175

Query: 180 MINDKWMINAQARYIDISTKATVDNNALGQGTRAKVNVDVDPMVYMVGIGYKF 232
           M+ D  M+NAQ RYIDI T+AT ++  LG   + KV+VDVDP VYMVG+GYKF
Sbjct: 176 MLTDNIMLNAQVRYIDIDTEATSNHAVLG---KVKVDVDVDPFVYMVGLGYKF 225