Pairwise Alignments

Query, 421 a.a., peptide ABC transporter permease from Pseudomonas simiae WCS417

Subject, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

 Score = 63.9 bits (154), Expect = 8e-15
 Identities = 74/307 (24%), Positives = 134/307 (43%), Gaps = 54/307 (17%)

Query: 106 SHRGYRVMGTNESYFEHYQYGRKQNLELASGRAFA-TDPFEVVLGAEVADALHYK---LG 161
           SH G  V+    S F H  Y +    E   GR    +D +  ++G  +A     +   +G
Sbjct: 111 SHYG-NVLVIEPSKFTHV-YSKTWGYEPYKGRWIEDSDKYSCMIGYALATNSFDREIDIG 168

Query: 162 DKLVLAHGVAVVSLVKHDDKPFTVVGILKRTGTPVDRTLHISLGGMEAIHIDWHNGVPAQ 221
           DK+ +            +DK + V+GIL+ TG P  RT +  +   +             
Sbjct: 169 DKITI------------NDKKYKVIGILEETGNP--RTENSVILSKDV------------ 202

Query: 222 GKGRISADQARNMDLTPQAITAFMLGLNNKISTFALQREINEFRGEPMLAILPGVALQEL 281
           G+     +   NM      I +   G +  + +  ++ E+ + RG+   ++L    L E 
Sbjct: 203 GEELFEINNEYNM-----MIVSVRSGEDVNLVSEEIKDELEDSRGDENFSVLTAEQLAE- 256

Query: 282 WSMMGTAEKALFVISLFVV-------LTGLIGMLTAILTSLNERRREMAILRSVGARPWH 334
                +      V+++F+V       L G +G+   +  S+ ERR+++ IL+++GA    
Sbjct: 257 -----SINSIFEVLTIFLVGVAGISLLVGAVGISNTMHMSILERRKDIGILKALGAENTT 311

Query: 335 IATLLIFEAFALALSGVVAGVGLLYVCIAASRGYLQANYGLDLPMSWPSEYEWTLLAGIL 394
           I ++ + EA  L L G + G  +L + IA +  Y+ A  G  L  +W S   W L+ G+L
Sbjct: 312 ILSIFVVEAGFLGLFGGIVGT-MLGILIAKAIEYIAAISGYGLIRAWIS---WELIVGVL 367

Query: 395 AAALLMG 401
             + ++G
Sbjct: 368 VFSFVVG 374