Pairwise Alignments

Query, 421 a.a., peptide ABC transporter permease from Pseudomonas simiae WCS417

Subject, 397 a.a., ABC transporter permease from Methanococcus maripaludis JJ

 Score = 59.7 bits (143), Expect = 2e-13
 Identities = 76/308 (24%), Positives = 134/308 (43%), Gaps = 56/308 (18%)

Query: 106 SHRGYRVMGTNESYFEHYQYGRKQNLELASGRAFA-TDPFEVVLGAEVADALHYK---LG 161
           +H G  V+    S F H  Y +    E   GR     D +  ++G  +A     +   +G
Sbjct: 111 THYG-NVLVIEPSKFTHV-YSKTWGYEPYKGRWIEDNDKYSCMIGYALATNSFDREIDIG 168

Query: 162 DKLVLAHGVAVVSLVKHDDKPFTVVGILKRTGTPVDRTLHISLGGMEAIHIDWHNGVPAQ 221
           DK+ +            +DK + V+GIL+ TG P  RT    +   +             
Sbjct: 169 DKITI------------NDKKYKVIGILEETGNP--RTEDSVILSKDV------------ 202

Query: 222 GKGRISADQARNMDLTPQAITAFMLGLN-NKISTFALQREINEFRGEPMLAILPGVALQE 280
           G+     +   NM      I +   G + NK+S   ++ E+ + RG+   ++L    L E
Sbjct: 203 GEELFEINDEYNM-----MIVSVRSGEDVNKVSE-DIEDELEDSRGDENFSVLTAEQLAE 256

Query: 281 LWSMMGTAEKALFVISLFVV-------LTGLIGMLTAILTSLNERRREMAILRSVGARPW 333
                 +      V+++F+V       L G +G+   +  S+ ERR+++ IL+++GA   
Sbjct: 257 ------SINSIFEVLTIFLVGVAGISLLVGAVGISNTMHMSILERRKDIGILKALGAENN 310

Query: 334 HIATLLIFEAFALALSGVVAGVGLLYVCIAASRGYLQANYGLDLPMSWPSEYEWTLLAGI 393
            I ++ + EA  L L G + G  +L + IA +  Y+ A  G  L  +W S   W L+ G+
Sbjct: 311 TILSIFVVEAGFLGLFGGIIGT-ILGILIAKAIEYIAAISGYGLIRAWIS---WELIVGV 366

Query: 394 LAAALLMG 401
           L  + ++G
Sbjct: 367 LVFSFVVG 374