Pairwise Alignments

Query, 631 a.a., TonB-dependent receptor from Pseudomonas simiae WCS417

Subject, 611 a.a., vitamin B12 transporter BtuB from Vibrio cholerae E7946 ATCC 55056

 Score =  217 bits (552), Expect = 1e-60
 Identities = 176/628 (28%), Positives = 279/628 (44%), Gaps = 31/628 (4%)

Query: 1   MNRLCFALPLLLLTSPDLLADTRDDALKLPNVVISANRQVQARNDSSAANTVFTRDDIDR 60
           M +   A+ L  L +P       ++A     VV++ANR  Q  + + A   + TR DI++
Sbjct: 1   MQKSALAIALASLLTPISYLHA-NEAQPQETVVVTANRFEQKASSTLADVEIITRQDIEQ 59

Query: 61  LQPTSVTDLLSRVPGVQVAPTGGRGSLPGIFIRGTKSAQSLVLVDGQRIANTTSGDSGLQ 120
            Q  ++ +LL R+ GVQ+   GGRG L  +F+RGT S Q LVLVDG R A    G     
Sbjct: 60  TQAKTLPELLRRLTGVQITQNGGRGQLASLFVRGTSSDQVLVLVDGIRFARAAKGAVDFN 119

Query: 121 YLNVDQIERVEVLRGSRSVIYGSDAIGGGIQVFTR-RNTEQGLQPRLKLGFGSNQTWERS 179
            + +  ++R+E +RG+R+ +YGS+AIGG I + T+ R+ +QG      LG    Q    +
Sbjct: 120 QIPLTYVDRIEYVRGARASLYGSEAIGGVINIITKARSQQQGTTVSAGLGSLDYQELSIA 179

Query: 180 LGLSGGDEHTRFNLGASLDDTAGINSTHTSFPSDGDHDAYRNQSLSLNLSHSFSDELEAG 239
            G++ G E  + N+    +   G N       +DGD   +R+ +  L   H F +     
Sbjct: 180 SGVAIG-EKGQMNVALGTESDKGYNVRPVPGVNDGDRHGFRSDNALLGYVHQFDESWSLF 238

Query: 240 FNLLDNRGKSEYDNSFGRYDATTGRTLGQKPYTNYTVSSASGYVDAKLNERWQSRLELGH 299
            N        +YDNS+G  D        +K   ++T+ +         +ERW S L+L  
Sbjct: 239 ANARAYENIYQYDNSYGTRDYKE----AEKDDLSFTIGT------QYQSERWVSELQLTT 288

Query: 300 SENRDTKRDTLSDDFS--VFNTYRDSVNWQNDLTLNDRNSLILGGDWYEDRFHGSTLFTE 357
            + +          +S    N  + ++ W N   +ND  +   G DW ++ +   T   E
Sbjct: 289 QKQKSWDYTQSKGKYSDTSDNLEQRNIQWINRYLVNDVWTFAGGVDWRDESYIDKTADKE 348

Query: 358 NSRWNRAAFVQHRFKGDWFSTELGLRRDQNQQFGGQNSWSGTLTLPVNPDNDVLLSYSEG 417
             R N AAF     +   +  E  LR D NQ++G Q + +  L     P+  V  SY   
Sbjct: 349 FDRSNTAAFAVVAAEWQQWLLEASLRFDDNQEYGSQTTHNIALGYQFIPEFGVKASYGSA 408

Query: 418 FRAPTFNDLYYPDTKYSNPNLQPETSKSYELQWRSQLSDSTRLEASLYRTDLSDAIILDR 477
           F+AP     Y  D  Y N NLQPE + S EL +    S    ++ S+   D     ++D 
Sbjct: 409 FKAPNLYQQY--DPSYGNVNLQPEDADSAELSFYGLFSG---IKWSITGYDYKINNLIDY 463

Query: 478 SGKPQN----VASARINGFEAALKQELFGWQGNLGLSIIDPRDRDSGHTLARRARRTVNL 533
           +   +N    +  + I G E   +      Q  L + + D  D   G TL RRA      
Sbjct: 464 NSTTKNYQNVIGESNIKGVEFTAEFATGIVQHQLSVDLKD-ADDSKGKTLQRRAEHMYKW 522

Query: 534 DLDRQFDKLGVGASWQAISSSYDDEDNTH-----RLGGYALLGLRSSWALNREVALSLKV 588
           +    F+++     +Q +    D + NT+      L  Y+L+    S+ +     +S ++
Sbjct: 523 NALVAFEQVDWSIGYQYVGKRPDLDYNTYPTQNITLDAYSLVDTSVSYYVTDSTTISARI 582

Query: 589 DNLLDKTYARAR-YSYNDPTYANNQDYR 615
           DNLLDK Y  A  Y   +  Y  N  Y+
Sbjct: 583 DNLLDKEYETANGYPAAERAYYLNIGYQ 610