Pairwise Alignments

Query, 179 a.a., capsular biosynthesis protein from Pseudomonas simiae WCS417

Subject, 175 a.a., polysaccharide biosynthesis/export family protein from Vibrio cholerae E7946 ATCC 55056

 Score =  153 bits (386), Expect = 2e-42
 Identities = 79/179 (44%), Positives = 112/179 (62%), Gaps = 4/179 (2%)

Query: 1   MFSHFLSSLILGLFLVLSTAVSAANDSQYKLASGDVIRINVFGEKDLSFDEVRLTDVGSF 60
           M  + LS L   L L++  +++ AND  Y+L  GD IRI V+ E +LSF E R++D G+ 
Sbjct: 1   MMKYLLSFL---LCLLVWPSLAVANDDFYRLGVGDQIRIQVYDEPELSF-ETRVSDNGNI 56

Query: 61  SYPFVGELHAKGKTAAQLERLITQKLKGEYLVDPRVSVSVLHYREFYIGGEVKNPGGYPF 120
            YPF+G +  KGKT  +++  I   L   YL++P VSVS+L YR F++ G+V  PG YP+
Sbjct: 57  DYPFLGRIRLKGKTLEEVKTTIHDGLLDGYLINPNVSVSILEYRPFFVNGQVMKPGSYPY 116

Query: 121 QPGLTLRRAVTLAGGLTERASEKRIIIISDQDGAKSTRKGSLDSTLSPGDTITINAGFF 179
            PGLT+ +A+T+AGG TERAS+  + I S  D      K +L S L PGD +T+   FF
Sbjct: 117 HPGLTVNKAITIAGGFTERASKTNLFISSSDDPEAKPTKATLLSKLQPGDILTVAESFF 175