Pairwise Alignments

Query, 738 a.a., lipopolysaccharide biosynthesis protein from Pseudomonas simiae WCS417

Subject, 703 a.a., putative exopolysaccharide biosynthesis transport protein from Phaeobacter inhibens DSM 17395

 Score =  228 bits (581), Expect = 8e-64
 Identities = 185/716 (25%), Positives = 336/716 (46%), Gaps = 47/716 (6%)

Query: 21  DLIDLLKFWRIIWGRKWSIFGLVFVISLVAALAAFTV-TPIYRAVASLLIEEKAAKVLSI 79
           +++DL   + IIW  +W I   V +  +V    A+ V TP+Y A   L+++ +  KV+ I
Sbjct: 26  EVLDLGAIFAIIWRGRWVIAACVLIGLIVGIWRAYIVATPLYGAEVQLVLDPRDEKVVDI 85

Query: 80  EQIYGADGSSSEYLQTQFELLKSRALAERVVTELKLVDNREFDPRQQPTPLLDIAAWKKS 139
           E +  +  ++ E ++T+  +L  R LA +VV  L L+ + EF+   +      +   K  
Sbjct: 86  ESVVSSLSATDEVIRTEVHILGGRELAGQVVDRLNLISDPEFNMMLRDPGFNPVQVLKDM 145

Query: 140 LSGLFGVPPAPLDGLEEQTKRFDEVTRAFMERVKVEPQGKSKLVKVQVEMADPRLAMVAA 199
           + G+ G+         +     ++V +  +   +V     + +  + V   +P  A   A
Sbjct: 146 IKGILGMQVYDTSLTPDPAFVREKVIQTLLANTRVVNIPDTYIFSIWVLSENPFKAADIA 205

Query: 200 NALANGFIERQLEASQGVSLAAGSWMSSRLDELRGQLKDSEELLQRYREAENLVDVGGVG 259
           NA A+ ++E Q+     V+  A  W++ R+ ELR QL+ +E  +   R   ++       
Sbjct: 206 NAFADTYVENQVAVKLNVTEQATGWLAERVTELRSQLEMNERRVADIRAQADVT------ 259

Query: 260 TISAAELAQTGDRMIDARRQRAEAESQYRQVQSIARNDWQRLGSVPAVLGHPLIQQFKAD 319
             S A+L    +R+I  R   AE  ++  + Q+ A+ +   L +V              +
Sbjct: 260 --SPAQLIGLENRLISLRSALAERAAEVAEQQA-AQTELTSLQTV--------------E 302

Query: 320 EARARAKVEELSKRYGARHPAMEAARSELSAASGSLRGQIEQVVAGIERNYQLAQANQTS 379
           E R  A+       YGA           + A + + +     V+A + R+ + A+A + +
Sbjct: 303 EQRVAAR----RNGYGA-----------ILARADNPQDGWRSVLAQLARDLREAEAKEQA 347

Query: 380 LQSSFDANKSRIQEISRKEFKLRELQREVDANRTLYETFTNRLKETAATSDLNSVTARVV 439
           ++ S    +  I   S    ++ + +R+ +A+R L+E F NRL+ET+    L    +RV+
Sbjct: 348 IRRSMADLEITIATQSDALTEVVQAERDAEASRLLFENFQNRLRETSMQIGLQRADSRVI 407

Query: 440 DPAVLPDKPAKPHKALIVFIAAMLTFFVAAGLTLLLDALNNTFKTAQQIEDHLNISVLGV 499
             A  PD+PA P+K  I+ ++  L  F+   L ++L        +A QI    ++ V+ V
Sbjct: 408 SRAFPPDRPALPNKGQILILSVFLGGFLGTVLVVVLQLSRARLHSAAQIAGLTSVPVIAV 467

Query: 500 MPLVEKSYRNQMSQVFHRNLDRRFSEAVRSIRTGIVLSGIDNPHQVLLVTSSVPAEGKSA 559
           +    +  R + +         R  EA+R++RT ++++  D P QV++ TS+   +GKS 
Sbjct: 468 LDQFSQKIRPEQASAL--GPQTRDGEAIRNLRTTLLMARGDVPPQVVVFTSAESGDGKST 525

Query: 560 LSISLACALGQLDR-VLLIDADMRRPSLAKSFQFPAGTPGLANLLAGTATEQECI--RQV 616
           LS ++A  + Q+ + VLL+D D+RR  L+         PGL ++L+G     E +    +
Sbjct: 526 LSAAMAHNMAQIGKSVLLVDGDLRRHYLSDPLADGNSKPGLFDVLSGRCDLAEAVLPGAL 585

Query: 617 NGIDVLCAGSVPPNPLELLSSPRFAALLNDLKGRYQRIIFDSAPTQVVSDALHLSTYVDF 676
              D+L AGSV  +  +LLS     ALL+  +  +  IIFD+ P  VV DA  +  + D 
Sbjct: 586 GQADILPAGSVSGSAADLLSQGGLTALLSVARSHWDIIIFDTPPISVVPDARIIGQHADL 645

Query: 677 VIYVSKWAATPIPLVEKGIGQLLQNKAPVKGIVLNQMDFDQAKADG---QSYDGYY 729
           +I +++W  T   +    + +L Q      GIVL ++        G   +S D YY
Sbjct: 646 LILLAQWNTTRQAVFTDALRELEQGGRSPDGIVLTKVKAAAKPLYGATKRSRDRYY 701