Pairwise Alignments

Query, 391 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 380 a.a., HflK protein (RefSeq) from Shewanella loihica PV-4

 Score =  282 bits (722), Expect = 1e-80
 Identities = 161/364 (44%), Positives = 214/364 (58%), Gaps = 23/364 (6%)

Query: 1   MAWNEPGGNSNNQDPWGGKRRNNGDRKGPPDLDEAFRKLQESLNGLFGGGKKRGGDDGGR 60
           MAWNEPG  +  QDPWG K   NG+ KGPPDLDE F+ + +       GGK  G      
Sbjct: 1   MAWNEPG--NKGQDPWGNK---NGNDKGPPDLDEVFKNISKRF-----GGKGNGA----- 45

Query: 61  TSKGGGYGLLGLGLV--VLAAVWLYSAVYVVDEQEQAVVLRFGKYYETVGPGLNIYFPPI 118
              GGG+  LG  +V  +   VW  S  Y V E E+ V LRFGKY   V PGL      I
Sbjct: 46  ---GGGFSALGFIIVLGIAVVVWGLSGFYTVKEAEKGVALRFGKYIGQVEPGLQWKATFI 102

Query: 119 DKKYMENVTRERAYTKQGQMLTEDENIVEVPLTVQYKISNLQDFVLNVDQPEISLQHATE 178
           D+ +  NV+  R+    G MLT DEN+V V L VQY + +   ++ +      SL+ AT+
Sbjct: 103 DEVFPVNVSNVRSIPASGSMLTADENVVLVELDVQYIVVDAYRYLFSAVDANSSLREATD 162

Query: 179 SALRHVVGSTAMDQVLTEGRELMASEIKERLQRFLDTYRTGITVTQVNVQSAAAPREVQE 238
           SALR+VVG   MD +LT GR+ +  +  E ++R +  Y  GI +  VN   A  P EV++
Sbjct: 163 SALRYVVGHNKMDDILTTGRDQIRRDTWEEVERIIKPYNLGIEIRDVNFLPARPPEEVKD 222

Query: 239 AFDDVIRAREDEQRSRNQAETYANGVVPEARGQAQRILEDANGYRDEVVSRAKGEADRFT 298
           AFDD I A+EDEQR   +AE Y+  V P+ARG  QR+ + AN Y++  +  A+G+  RF 
Sbjct: 223 AFDDAIAAQEDEQRFIREAEAYSREVEPKARGTVQRMEQQANAYKEREILEARGKVARFE 282

Query: 299 KLVAEYRKAPEVTRERLYLDTMQEVFSNTSKVLVTGSKGGQNNLLYLPLDKMIE-GGRSS 357
           KL+ EY+ APEVTR RLY+D M  V S T+KVLV    G  NN++YLPLDK++E   ++ 
Sbjct: 283 KLLPEYKAAPEVTRARLYIDAMSNVLSGTNKVLVDSKAG--NNMMYLPLDKLMEQRPQTK 340

Query: 358 TSAP 361
           TS P
Sbjct: 341 TSKP 344