Pairwise Alignments

Query, 391 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 268 a.a., hypothetical protein from Methanococcus maripaludis S2

 Score = 86.3 bits (212), Expect = 9e-22
 Identities = 64/262 (24%), Positives = 127/262 (48%), Gaps = 8/262 (3%)

Query: 69  LLGLGLVVLAAVWLYSAVYVVDEQEQAVVLRFGKYYETVGPGLNIYFPPIDKKYMENVTR 128
           LLG+ L+VL    +  +V +V++ E  ++ R GK    + PG+N   P ID     +V  
Sbjct: 8   LLGIFLLVL----IIKSVIIVNQFELGLIFRLGKVRGRLNPGVNFIIPFIDVPIKVDVRT 63

Query: 129 ERAYTKQGQMLTEDENIVEVPLTVQYKISNLQDFVLNVDQPEISLQHATESALRHVVGST 188
           +       +M+T D   V +   + Y++ ++   +L V   + ++ +  +++LR ++GS 
Sbjct: 64  KVIDVPPQEMITRDNAGVRIDAVIYYRVMDVNRAILEVQNFQYAIINLAQTSLRAIIGSL 123

Query: 189 AMDQVLTEGRELMASEIKERLQRFLDTYRTGITVTQVNVQSAAAPREVQEAFDDVIRARE 248
            +D  L + RE + S++ E L R  DT   G+ V +V ++    P +++ A    ++A  
Sbjct: 124 ELDDALNK-REFINSQLLETLDR--DTDAWGVKVEKVELREIEPPTDIKNAMTQQMKAER 180

Query: 249 DEQRSRNQAETYANGVVPEARGQAQRILEDANGYRDEVVSRAKGEADRFTKLVAEYRKAP 308
            ++ +  +AE      + +A+G A+ +  +A G + + +      A  + K  A+  KA 
Sbjct: 181 LKRAAILEAEGEKQSKILKAQGTAESMKIEAEG-QAKAIQIVAESAQNYFKNEAQLYKAL 239

Query: 309 EVTRERLYLDTMQEVFSNTSKV 330
           +VT   L  +T   +  N   V
Sbjct: 240 DVTSNTLKDNTKFVISENIMDV 261