Pairwise Alignments

Query, 839 a.a., fimbrial assembly protein from Pseudomonas simiae WCS417

Subject, 847 a.a., Outer membrane usher protein FimD from Enterobacter sp. TBS_079

 Score =  296 bits (757), Expect = 4e-84
 Identities = 232/838 (27%), Positives = 396/838 (47%), Gaps = 55/838 (6%)

Query: 5   DVQFNTDVLDLGD--RTNIDLSQFSRSGFILPGTYPMVIKLNTNTLPEQSVAFYPPDNDL 62
           D  FN  +LD+ +  +   DLS + +     PG Y + I +N N +  + V F     D 
Sbjct: 34  DDYFNPALLDIDNPQQGKTDLSVYEKGPGQAPGKYQVNIFINNNKIDTRDVTF-KLIKDA 92

Query: 63  KGS---QACLTPSIVEQFGLKKEKMTQLSWWKGGQCLDFHSLPGLEAVGDLASASLNVNV 119
           +G+   Q C +   ++  G+K  +   L     GQC D +++P   A   +    L +++
Sbjct: 93  QGNHSLQPCFSLDELKNLGIKTRQYPPLM--AKGQCADINAIPAASATFQVRHQQLLLSI 150

Query: 120 PQAYLEYTSINWDPPARWDEGISGLMVDYNMTAQSNYQREEGTRNNVSG--NGTVGANAG 177
           PQ  L      +  P  +DEGI+  +++Y+ TA  ++ R +G ++N S   N   G N G
Sbjct: 151 PQTALGQVPRGYIDPKTFDEGITAGLLNYSATASQSHARVQGEQDNSSQYVNLRPGLNVG 210

Query: 178 AWRLR--ADWQGRFDGGKTDGNQRMEWSRYYAYRAIPALRAQLVLGEDYLYSDLFDSFRF 235
           AWR+R  + W     G + +   R      YA R I A+++ + +G+    SD+FDS  +
Sbjct: 211 AWRIRNYSTWNRSTTGNEEE--HRFSSVYTYAQRDIVAMKSDMTVGQSTSPSDVFDSVPY 268

Query: 236 TGASLKSDESQLPPNLRGYAPEVVGVAKTNARVIISQQGRILYETVVAAGPFRIQDL-ND 294
           TG  LKSD   LP + +GYAP + G A +NA V++ Q G ++Y+  VA G F I DL   
Sbjct: 269 TGVELKSDTDMLPDSEKGYAPIIRGTAHSNALVMVRQNGYVIYQNTVAPGAFEINDLYPT 328

Query: 295 AVTGSLDVKIEEQDGSVHTFQVDTAGVPYLTRPGQVRYKVAAGRPSNLLYGDDGDPFASG 354
             +G L V ++E DGS   F V  A VP L R   +RY V AGR  +     +  PFA G
Sbjct: 329 GSSGDLQVTVKETDGSESHFVVPYASVPVLQREKNLRYSVTAGRYRSYDKDVEQTPFAEG 388

Query: 355 EFSWGVSNGWSLFGGGMGDNNYRALSVGIGRDLLAFGAVSVDATQSSATLSGEELS-GKS 413
              +G+  G++ +GG     +Y++ ++G+G++L   GA S+D T++ A L  ++ S G+S
Sbjct: 389 SAIYGMPLGFTAYGGAQQSRHYQSRALGVGKNLGDLGAFSLDVTRAKALLKKQQTSKGRS 448

Query: 414 YRLQYSKSFDEYDSHVSFAGYRFSEKNYLSMSEYLDARHYGLYDQLGSGGEYGEGGERRK 473
           +R++YSK F    +H S AGYR++ K + ++ + +++          +  + G   ++R 
Sbjct: 449 WRVRYSKDFVASGTHFSLAGYRYNSKGFYTLEDTMESY---------TRSDDGSAPQQR- 498

Query: 474 PIGGSKAAYTATFNKQFRDLGASFYLSYNKQTYWNR-PDTQRWNLALSRYFSVGSVKNIN 532
                +A   AT ++       S  LS  K+TYW++  D    +++ +  +  G   +++
Sbjct: 499 -----RARTEATVDQTLPAGWGSVTLSLVKETYWSQSQDMTSMSVSYNNSWH-GVSYSLS 552

Query: 533 ASLNLHRSE-----DYNTRDNGMTLSVSVPLGR-------TGTLTTSVD--RDRNGIDFS 578
            S+N +  +     D    DN  +L+VSVPL R       T  L  + D      G++ +
Sbjct: 553 YSMNKNTQDSDANGDDVMNDNQFSLNVSVPLDRWMHNTWATYNLNNTKDGTTQNIGLNGT 612

Query: 579 TRYSDRLDERNSYQVSAGDDSVSGYLSHTGELADVDLSASTEGSRY-SSVSLSARGGATL 637
               D L+      +S+     S  ++   +    ++S      +Y  +V++  +GGA +
Sbjct: 613 ALKGDNLNWNIQEGLSSTGSGNSTSMNADYKATYGEVSGGVSQDKYQQTVNVGLQGGAIV 672

Query: 638 TPQGGALHRAGTMGGTRLMVDTDGVADVPVRGYGVSTRTNTFGKAVISDIGSYQRTSASV 697
              G  L +   +G T  +V   G     +        T+  G  V+  +  Y+  + ++
Sbjct: 673 HANGITLSQ--PLGETIALVKAPGTHGTHIANQ-TGVETDFRGYTVVPFVTPYRHNTIAL 729

Query: 698 DLENLPTNVEATQSVTQLTLTEGAIGYRKLEVIAGAKAMAVLRLPDGSSPPFGALVKNIK 757
           D E LP   + T +   +T T GA+         G++ +  L   +G   PFGA V    
Sbjct: 730 DTETLPDEADVTHAAYVVTPTRGAVVRASFNTRVGSRVLMTL-THNGKPLPFGATVTTED 788

Query: 758 QQDTGVLNDGGSVYLSGIQAGGQMTVSWG--GAERCTLTLPNILPADGLTNILNLPCQ 813
           +    ++ + G  YLSG+   G + V+WG   +E C      +      TNILN   Q
Sbjct: 789 KDSEFIVGNDGQTYLSGLPKQGHLAVTWGQDASEHCEADYV-LTDETEKTNILNAAAQ 845