Pairwise Alignments

Query, 86 a.a., RNA-binding protein Hfq from Pseudomonas simiae WCS417

Subject, 87 a.a., RNA-binding protein Hfq from Vibrio cholerae E7946 ATCC 55056

 Score =  117 bits (294), Expect = 2e-32
 Identities = 61/83 (73%), Positives = 68/83 (81%), Gaps = 2/83 (2%)

Query: 1  MSKGHSLQDPYLNTLRKEKVGVSIYLVNGIKLQGTIESFDQFVILLKNTVSQMVYKHAIS 60
          M+KG SLQDP+LN LR+E++ VSIYLVNGIKLQG IESFDQFVILLKNTV+QMVYKHAIS
Sbjct: 1  MAKGQSLQDPFLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILLKNTVNQMVYKHAIS 60

Query: 61 TVVPVRPIRLPSAAGDDAADAEP 83
          TVVP RP+   S  GD  A   P
Sbjct: 61 TVVPARPVSHHS--GDRPASDRP 81