Pairwise Alignments

Query, 525 a.a., transposase from Pseudomonas simiae WCS417

Subject, 522 a.a., Mobile element protein from Pseudomonas fluorescens FW300-N2E2

 Score =  883 bits (2282), Expect = 0.0
 Identities = 432/520 (83%), Positives = 468/520 (90%)

Query: 1   MISPPSLDQLNPEQLRALATQVMQRVETLDHQVDTLGKTVETMGRKIHRDRTVIEKLTHE 60
           M S P+LD L PEQLRALA Q++QRVETLDHQVDTLGKTVETMG+KI+RD+TVIEKLTHE
Sbjct: 1   MTSLPNLDHLTPEQLRALAAQLIQRVETLDHQVDTLGKTVETMGKKINRDQTVIEKLTHE 60

Query: 61  IAQLKRFKFAKRSEQHSPAQAGLLDDLIDTDIAAIEAELEALQAKPASIETKQKPKRTAL 120
           IAQLKR KFAKRSEQ +P QAGLLDDL+DTDIAAIEAEL+ALQ   A  E KQKPKRTAL
Sbjct: 61  IAQLKRLKFAKRSEQMNPEQAGLLDDLVDTDIAAIEAELQALQTVLAPTEKKQKPKRTAL 120

Query: 121 PPQFPRTLIHHEPDNTQCACGCALKRIGEDVSEKLDYTPGVFTVERHIRGKWVCDDCETL 180
             +FPRTLIHHEPDNT C C CALKRIGEDVSEKLDYTPGVFTVERHIRGKWVCDDCETL
Sbjct: 121 SAEFPRTLIHHEPDNTHCPCACALKRIGEDVSEKLDYTPGVFTVERHIRGKWVCDDCETL 180

Query: 181 IQAPVPAQIIDKGIPTAGLLAQVMIAKYGDHLPLYRQEQIFGRAGLAIPRSTLAQWVGTC 240
           IQAPVPAQ+IDKGIPTAGLLA VMIAK+ DHLPLYRQE IFGRAGLAIPRSTLAQWVG  
Sbjct: 181 IQAPVPAQVIDKGIPTAGLLAHVMIAKFADHLPLYRQESIFGRAGLAIPRSTLAQWVGVT 240

Query: 241 GVQLQPLVDALRGVVLGHNVVHADETPVQVLMPGAKKTHRAYVWAYASSAFADIKAVVYD 300
           GVQLQPLVDALR VVLG  V+HADETPVQ+L+PG+KKT R+YVWAY +S F+++ AVVYD
Sbjct: 241 GVQLQPLVDALRDVVLGQQVIHADETPVQMLVPGSKKTQRSYVWAYTTSQFSNLAAVVYD 300

Query: 301 FTPSRAGEHARRFLQDWKGKLVCDDFGGYKASFSLGVTEIGCMAHARRKFFELHATNKSQ 360
           F+PSRAGEHAR FLQDWK KLVCDDFGGYKASF LGVTEIGCMAHARRKFFELHATNKS 
Sbjct: 301 FSPSRAGEHARNFLQDWKCKLVCDDFGGYKASFELGVTEIGCMAHARRKFFELHATNKST 360

Query: 361 LAEQALRYIQVLYEIEREVRDLEPDLRRRIRQEKAAPAMDVLHTWMIAQRERMHDGVAIA 420
           LAEQALRYIQ+LYEIE EVRDLEPDLRRRIRQE+A P MD+LH WMIAQR+ + +G AI+
Sbjct: 361 LAEQALRYIQLLYEIESEVRDLEPDLRRRIRQERAVPVMDMLHAWMIAQRDLVPEGSAIS 420

Query: 421 KAFDYSLKRWTALSRYLDDGAVPIDNNHAEQQIRPWALGRKNWLYAGSLRSGQRAAALMS 480
           +A DYSLKRW ALSRYLDDG VPIDNN  E QIRPWALGRKNWL+AGSLRSG+RAAA+MS
Sbjct: 421 RALDYSLKRWAALSRYLDDGDVPIDNNWCENQIRPWALGRKNWLFAGSLRSGKRAAAIMS 480

Query: 481 LIQSAKLNGHDPYAYLKDVFTRLPTQRASEIAELLPHNWT 520
           LIQSA+LNGHDPYAYLKDV TRLPTQ AS+I +LLPH WT
Sbjct: 481 LIQSARLNGHDPYAYLKDVLTRLPTQHASDIDQLLPHQWT 520