Pairwise Alignments

Query, 525 a.a., transposase from Pseudomonas simiae WCS417

Subject, 545 a.a., Transposase from Sinorhizobium meliloti 1021

 Score =  283 bits (724), Expect = 1e-80
 Identities = 176/491 (35%), Positives = 249/491 (50%), Gaps = 24/491 (4%)

Query: 53  VIEKLTHEIAQLKRFKFAKRSEQHSPAQAGLLDDLIDTDIAAIEAELEALQ--------A 104
           +I +L   IA+LK+  F K SE+       L   L D  IAA E   + L         A
Sbjct: 44  LIGELRLRIAKLKKQVFGKSSEKIEREIQQLELALEDLLIAAAENSTKPLDEVDAAVPAA 103

Query: 105 KPASIETKQKPKRTALPPQFPRTLIHHEPDNTQCACGCALKRIGEDVSEKLDYTPGVFTV 164
             AS   K   +R  +  +  R     +P      CG  L+ +GED SE LD       V
Sbjct: 104 PVASRPEKTMRRRPRVSEKAARERKELDPGTCCPDCGGELRLVGEDASEILDMIAAQMKV 163

Query: 165 ERHIRGKWVCDDCETLIQAPVPAQIIDKGIPTAGLLAQVMIAKYGDHLPLYRQEQIFGRA 224
               R K  C  CE ++Q P P++ I   +  AGLLA ++++K+ DHLPLYR  +IF R 
Sbjct: 164 IEVARLKKSCRCCEKMVQLPAPSRPIPGSMAGAGLLAYILVSKFDDHLPLYRLNEIFARM 223

Query: 225 GLAIPRSTLAQWVGTCGVQLQPLVDALRGVVLGHNVVHADETPVQVLMPG------AKKT 278
           G  IP STL  W G     LQPL++ +  VV+  +++HAD+TP++VL          K  
Sbjct: 224 GADIPDSTLVDWCGRAMQVLQPLIERIEAVVMSSDLLHADDTPIRVLDRSLRDKGLGKGV 283

Query: 279 HRAYVWAYASS----AFADIKAVVYDFTPSRAGEHARRFLQDWKGKLVCDDFGGYKASFS 334
            +  +W Y       A A     VY F P    EH    L+   G L  D + GY   + 
Sbjct: 284 KKGRIWTYVRDQRPWAGAAPPGAVYYFAPDWKEEHVHHHLRQTSGILQADGYKGYGKLYE 343

Query: 335 LGVTEIG------CMAHARRKFFELHATNKSQLAEQALRYIQVLYEIEREVRDLEPDLRR 388
            G   IG      C AH RR F ++  +NKS++A +AL  I  LY+IER++     D+R 
Sbjct: 344 PGADGIGRFREAACWAHWRRDFHDIWTSNKSEIAREALDRIGALYDIERDIAGQPADIRL 403

Query: 389 RIRQEKAAPAMDVLHTWMIAQRERMHDGVAIAKAFDYSLKRWTALSRYLDDGAVPIDNNH 448
             RQ+ +   ++ L  W  AQ  R+     +A AF Y L RW +   +L+DG V +DNN 
Sbjct: 404 AARQKHSTAKVEALRVWAEAQLTRIPGKGDLASAFRYGLSRWHSFCLFLEDGRVAMDNNA 463

Query: 449 AEQQIRPWALGRKNWLYAGSLRSGQRAAALMSLIQSAKLNGHDPYAYLKDVFTRLPTQRA 508
           AE+ +RP  +GRKNWL+AG+    +  A  M++I++AK+NG DP AYL DV  R+   + 
Sbjct: 464 AERALRPIGIGRKNWLFAGADTGAETLARAMTIIETAKMNGIDPQAYLADVLDRIHDHKI 523

Query: 509 SEIAELLPHNW 519
           + + ELLP NW
Sbjct: 524 NRLDELLPWNW 534