Pairwise Alignments

Query, 525 a.a., transposase from Pseudomonas simiae WCS417

Subject, 421 a.a., transposase from Sinorhizobium meliloti 1021

 Score =  150 bits (380), Expect = 7e-41
 Identities = 109/325 (33%), Positives = 149/325 (45%), Gaps = 24/325 (7%)

Query: 53  VIEKLTHEIAQLKRFKFAKRSEQHSPAQAGLLDDLIDTDIAAIEAELEALQ--------A 104
           +I +L   IA+LK+  F K SE+       L   L D  IAA E   + L         A
Sbjct: 44  LIGELRLRIAKLKKQVFGKSSEKIEREIQQLELALEDLLIAAAENSTKPLDEVDAAVPAA 103

Query: 105 KPASIETKQKPKRTALPPQFPRTLIHHEPDNTQCACGCALKRIGEDVSEKLDYTPGVFTV 164
             AS   K   +R  +  +  R     +P      CG  L+ +GEDVSE LD       V
Sbjct: 104 PVASRPEKTMRRRPRVSEKAARERKELDPGTCCPDCGGELRLVGEDVSEILDMIAAQMKV 163

Query: 165 ERHIRGKWVCDDCETLIQAPVPAQIIDKGIPTAGLLAQVMIAKYGDHLPLYRQEQIFGRA 224
               R K  C  CE ++Q P P++ I   +  AGLLA ++++K+ DHLPLYR  +IF R 
Sbjct: 164 IEVARLKKSCRCCEKMVQLPAPSRPIPGSMAGAGLLAYILVSKFDDHLPLYRLNEIFARM 223

Query: 225 GLAIPRSTLAQWVGTCGVQLQPLVDALRGVVLGHNVVHADETPVQVLMPG------AKKT 278
           G  IP STL  W G     LQPL++ +  VV+  +++HAD+TP++VL          K  
Sbjct: 224 GADIPDSTLVDWCGRAMQVLQPLIERIEAVVMSSDLLHADDTPIRVLDRSLRDKGLGKGV 283

Query: 279 HRAYVWAYASS----AFADIKAVVYDFTPSRAGEHARRFLQDWKGKLVCDDFGGYKASFS 334
            +  +W Y       A A     VY F P    EH    L+   G L  D + GY   + 
Sbjct: 284 KKGRIWTYVRDQRPWAGAAPPGAVYYFAPDWKEEHVHHHLRQTSGILQADGYKGYGKLYE 343

Query: 335 LGVTEIG------CMAHARRKFFEL 353
            G   IG      C AH RR F ++
Sbjct: 344 PGADGIGRFREAACWAHWRRDFHDI 368