Pairwise Alignments

Query, 1203 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 857 a.a., autoinducer 2 sensor kinase/phosphatase LuxQ from Vibrio cholerae E7946 ATCC 55056

 Score =  196 bits (499), Expect = 5e-54
 Identities = 151/525 (28%), Positives = 264/525 (50%), Gaps = 48/525 (9%)

Query: 560  LQAQIKKRKRAETALSDQLSFSKTLIDGSPIALYVRDKAGKLVHCN-RAYLEFLQITHED 618
            L+   ++    E    D  +F+      SP  L+  + +G+L+  N  A ++FL+   ++
Sbjct: 345  LEQSFRRLANKEKQFEDLFNFAL-----SPTMLW--NTSGRLIRMNPSAQIQFLREDAQN 397

Query: 619  VLGKTLPDAEILPVSLSAQYDQIYQNSEQGAEPAFADLEIEVQGQPHRIYHWTLPFQSSA 678
                 + + ++LP            N+ QG  P+  D+  EV G   R+Y W L      
Sbjct: 398  HFLFEILERQLLPT---------ITNAAQGNNPS--DVTTEVDG---RVYRWNLSPIMVE 443

Query: 679  GEFSGVIGGWLDISEREQLVEQLRVAKQAADEANESKSIFLASMSHEIRTPISALIGLIE 738
            G+   +I    DI+   +  +Q + A++ A+E+   ++ FLA MSHE+RTP++ ++G+ +
Sbjct: 444  GQIISIITQGQDITTIAEAEKQSQAARREAEESARVRAEFLAKMSHELRTPLNGVLGVSQ 503

Query: 739  MLRVRGGTPQQINDNLAVAHESAQSLLSLIGDILDLSKIEAGAMVLSPRPTRLSELLHSV 798
            +L+ R     +  +++AV   S + LL+++ DILD S++E G   +     RL EL+ ++
Sbjct: 504  LLK-RTPLNDEQREHVAVLCSSGEHLLAVLNDILDFSRLEQGKFRIQKNEFRLKELVCAI 562

Query: 799  HKLFEINARNKHLTFDLIIDVQDQHVI-IDALMLNQIIANLVSNAIKFTEQGFVQLSLKQ 857
             +++      K L   +  ++    ++  D + +NQI+ NL++NAIKFT QG +++ L+ 
Sbjct: 563  DRIYRPLCNEKGLELVVNSNITTAAIVRSDQIRINQILFNLLNNAIKFTHQGSIRVELQL 622

Query: 858  SPNDSESNLARYVIEVRDSGLGLNEQQKKAIFEPFVQVVSAPTSTR---GTGLGLSICMR 914
               D    LA+ VI+V D+G+G+ EQ    IFEPF+Q  S  T+TR   G+GLGL+I   
Sbjct: 623  IEGDP---LAQLVIQVVDTGIGIREQDLTVIFEPFMQAES--TTTREYGGSGLGLTIVHS 677

Query: 915  LAQLLEAQLSVDSQPDKGSSFKLQFEAERT----LPEDVQESTQPQAPAGMSLNILVAED 970
            L ++L  QL V S+   G+ F++Q   E       P+ +  +  PQ     +L +L+ ED
Sbjct: 678  LVEMLSGQLHVSSEYGIGTRFEIQLPIELVEKPDAPQQLLPAPDPQPLFDKTLRVLLVED 737

Query: 971  HAANRLLLCQQLEYLGHNAIPCDDGETALAQWQAADPPFDLTITDCNMPHMDGYELTRRI 1030
            +  N  +        G +     DG  A+ + +  D  +DL + D  +P++DG E TR I
Sbjct: 738  NHTNAFIAQAFCRKYGLDVSWVTDGLQAIEELKIHD--YDLVLMDNQLPYLDGVETTRTI 795

Query: 1031 RTLEQSRGLGLH---PIFGLTANAQSHIIQDCLDAGMTQCLFKPI 1072
            + +       LH    ++  TA+      Q    AG    L KP+
Sbjct: 796  KKV-------LHLPVVVYACTADGLEETRQAFFHAGAEYVLVKPL 833