Pairwise Alignments

Query, 1203 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 785 a.a., aerobic respiration two-component sensor histidine kinase ArcB from Vibrio cholerae E7946 ATCC 55056

 Score =  196 bits (498), Expect = 6e-54
 Identities = 171/662 (25%), Positives = 310/662 (46%), Gaps = 51/662 (7%)

Query: 560  LQAQIKKRKRAETALSDQLSFSKTLIDGSPIALYVRDKAGKLVHCNRAYLEFLQITHEDV 619
            L+ ++ +R++ +  L+++ +  ++ ID SP  +Y R+  G+   CNRA  E       ++
Sbjct: 136  LENEVYQREKTQVELAERTALLRSFIDASPDLIYYRNAKGEFSGCNRAMEELTGKRESEL 195

Query: 620  LGKTLPDA--EILPVSLSAQYDQIYQNSEQGAEPAFADLEIEVQGQPHRIYHWTLPFQSS 677
            +G T  D   + +  S+     Q++ N+       + +      G+        +PF + 
Sbjct: 196  VGLTPWDVYRKEIAQSIVETDQQVFNNNTAITYEQWLEYP---DGRKSFFELRKVPFYNK 252

Query: 678  AGEFSGVIGGWLDISEREQLVEQLRVAKQAADEANESKSIFLASMSHEIRTPISALIGLI 737
             G   G++G   DI+ER++  E L       ++A+  K+ F++++SHE+RTP++ ++GL 
Sbjct: 253  DGRHLGLVGFGRDITERKRHEESL-------EKASRDKTTFISTISHELRTPLNGIVGLS 305

Query: 738  EMLRVRGGTPQQINDNLAVAHESAQSLLSLIGDILDLSKIEAGAMVLSPRPTRLSELLHS 797
             ML     + +Q   +L   + SA +L ++  DI+D+ K +   + L P      E +  
Sbjct: 306  RMLLDTPLSGEQ-RKHLQTINVSAVTLGNIFNDIIDMDKFDRRKLELFPAALNFEEFVAE 364

Query: 798  VHKLFEINARNKHLTFDL--IIDVQDQHVIIDALMLNQIIANLVSNAIKFTEQGFVQLSL 855
            +  L  + A  K L FDL  + D+    V +D+  L Q++ NL+SNA+KFT++G V +++
Sbjct: 365  IEVLAALMAEQKGLRFDLERLTDLPSL-VEVDSTRLRQVLWNLLSNAMKFTKEGGVVMTV 423

Query: 856  KQSPNDSESNLARYVIEVRDSGLGLNEQQKKAIFEPFVQVVSAPTSTR--GTGLGLSICM 913
                 + ++  A   IEV D+G+G+ E +++ IF  + QV S   +    GTG+GL++  
Sbjct: 424  SA---ECDAQHAEITIEVEDTGIGIPEAEQEKIFAMYYQVKSGKDNLHAVGTGIGLAVSR 480

Query: 914  RLAQLLEAQLSVDSQPDKGSSFKLQFEAERTLPEDVQESTQPQAPAGMSLNILVAEDHAA 973
            +L +L+   +SV+S+   GS+F +       L  +     +PQ P    LNI + ED   
Sbjct: 481  QLIKLMGGDISVNSEEGFGSTFTVTIRV--PLLAEAPIEIEPQEPQ-TELNIFMVEDIEL 537

Query: 974  NRLLLCQQLEYLGHNAIPCDDGETALAQWQAADPPFDLTITDCNMPHMDGYELTRRIRTL 1033
            N  +    LE +GH       GE A+  +   +  +DL   D  +P M G+++    RT 
Sbjct: 538  NITVARSLLESMGHKVTVAMTGEEAIQGFNPTE--YDLVFLDIQLPDMTGFDIAHYYRTH 595

Query: 1034 EQSRGLGLHPIFGLTANAQSHIIQDCLDAGMTQCLFKPIGIEILAEQIYAVTAQIERQVK 1093
              S    L P+  LTAN      ++    GM   + KP+ +  + E I  +T     +  
Sbjct: 596  YSS----LPPLVALTANVLKD-KEEYRQKGMDAAISKPLSVAAVREVIAKMTQHHAGESV 650

Query: 1094 AASTTGGE-------------LEKLRILCPDAYSPLVEELINTNRQD----AARLEQMLI 1136
            A   +  E             LE L+       S  V + ++   Q      A L+  ++
Sbjct: 651  AKVKSNKEKELPDDLYQQLLDLEMLQSYVEIVGSQPVIDSVHLFEQSMPAYLAVLDSNMV 710

Query: 1137 NNELKKISGLAHKIKGGA---QLADARNLIEACMQLESLAHLDDANACEEQIKTVIQIML 1193
              + + I   AHKIKG A    L   + + +     E+ A  ++ +   E+IK   Q  +
Sbjct: 711  AKDQEGIVSEAHKIKGAAGSVGLKRIQKIAQKAQSPEAPAWWENISDWVEEIKNEYQSDI 770

Query: 1194 SL 1195
            +L
Sbjct: 771  AL 772