Pairwise Alignments

Query, 1203 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 1176 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

 Score =  244 bits (622), Expect = 4e-68
 Identities = 296/1255 (23%), Positives = 537/1255 (42%), Gaps = 195/1255 (15%)

Query: 48   PQTRAWLSNRPEVTAAIWRGAWPPLHMGFEQNQFEGVAADYLGVIQAATGIRLKVLRFAS 107
            P  +A++  +  VT A+ +  W P   G  Q    G+  D+   I    GI ++   F +
Sbjct: 9    PNEQAYVEQKSTVTIAVLKEIWMPYWGGTGQEPI-GIEHDFASGIAKELGINIEYKGFDT 67

Query: 108  RAEAREALLQGRVDMLALHDVSEGQEGAITQSRPYLLNNKVIAHRIGETRQLSSDLAGQR 167
                  A+  G+ DM      +  +EG    S+P   N +VI  R  +        A  +
Sbjct: 68   IEALLNAVSTGKADMAIGFGQTLAREGKFLFSKPLYENVRVIWLR--DKAMEEKPFASLK 125

Query: 168  LAYVGDDAVGALLKQQ-YPKATLIQYTNHLNGLTSLIYEQADAFLTDAV-VGEYLI---- 221
               +   +   +LK + YP   +I   N+ + +  +    ADA +T+ V +  YL     
Sbjct: 126  WVCIQGTSYCEILKDRGYPN--IIMARNYSSSVEMIRQGIADATVTNYVSLNHYLSQKRL 183

Query: 222  ---RVLYNNDIYIAGDATTTSADINFAVSDRKPQLLAAINDTLNALPQNDMKRIT-SRWG 277
               +V+++ D+ +  +           +++ +P LL+AIN  ++A    D + +T ++  
Sbjct: 184  ALGKVIFDPDLGVQTN--------RILINNNEPLLLSAINKVIDA----DKQGLTENKLN 231

Query: 278  LGD-HFVADRSPLELTSEELTWIENHKKIKVVLAASYAPLSFYDQNNR-LQGLTADLLAI 335
              D +F+ D++ L +   E      +  ++  +     P+S++D+  +  +G   DLL  
Sbjct: 232  SADVYFLNDQANLNILRNENV----NPVVRYTIQDDLFPMSYWDEKEKKYKGYVHDLLER 287

Query: 336  LAQRTGLEIDVVRS--DSVSNMLKRLEDNQVDLIAALSIG--------------DLRLNP 379
            ++ ++ L+ + V +    V +ML+     +VDLI + ++               D++   
Sbjct: 288  ISTKSILKFEFVPAYGRDVEDMLRH---GKVDLIPSFNMTYVDDRYFIHTGRYTDIQFGY 344

Query: 380  SQYTRPYTVSPFVVITKRQSPIRDLSELNGKRLA-IPVGNPLTKWLQQQHPGVIQVPVET 438
             + TRPYT           +PI  + +  GK  A I V   L+            V V  
Sbjct: 345  IETTRPYT-----------TPITGILDRTGKFNAYIAVQKNLS-----------DVKVYR 382

Query: 439  AARGVE-LVSNGDVTASVHTQLGADYFIKHHFRSDLMISGMVGPNPAR--IGMVVSTEDM 495
            +   +E  +  GD+T  +  ++  +  +    +    +S +      R  + M+V  +  
Sbjct: 383  SMYDLEQALEKGDITHGLLNKVLINQMLLDGHQDAFKLSPLTEGQDLRADMTMLVRKDAR 442

Query: 496  PLKSIINKVLLEIPPEEFKTLSDRWRNHAAPAVASSWSTYKSSVYKVIGVALLFLLAFLI 555
             L++++ KVL     +E   +   +       V   +   K  +Y +I +  L  +  ++
Sbjct: 443  GLQNMLQKVLATFSQQEIDEIKGAYDR---VTVYFGYDKQKVLIYALIILCALLSIGLIL 499

Query: 556  WNYY--LQAQIKKRKRAETALSDQLSFSKTLIDGSPIALYVRDKAGKLVHCNRAYLEFLQ 613
                  L+ +++  ++     ++QL +   L+D  P  +++ D  G++V  N AY +   
Sbjct: 500  TLSLSRLRGKLRSSEQVAKLSTEQLRWLTELLDAIPSMIFISDAKGEVVLTNAAYRKIYH 559

Query: 614  ITHEDVLGKTLPDAEIL--PVSLSAQYDQIYQNSEQGAEPAFADLEIEVQGQPHRI---- 667
               E    +  P+   L  P    A++  I Q  +           +  +   H I    
Sbjct: 560  TCCEKGCVQPQPECSFLALPDQHEAEFSIIIQAPKSNCSIGEHYFHVTRRAISHPINQRK 619

Query: 668  YHWTLPFQSSAGEFSGVIGGWLDISEREQLVEQLRVAKQAADEANESKSIFLASMSHEIR 727
            Y+ TL               + DI+E ++  + LR + + A +A E+++ FLA +SHE+R
Sbjct: 620  YYLTL---------------FNDITELKETEQALRQSNEQALQAVEARNHFLAVVSHELR 664

Query: 728  TPISALIGLIEML--RVRGGTPQQINDNLAVAHESAQSLLSLIGDILDLSKIEAGAMVLS 785
            TPI+A++GL+E+L  R++    Q +  N   A  SA+ L   + DILD SKIEA  + L 
Sbjct: 665  TPIAAMLGLMEILASRLKSSESQLLLTN---AISSAERLKLHVNDILDFSKIEAQQLQLD 721

Query: 786  PRPTRLSELLHSVHKLFEINARNKHLTFDLIIDVQDQHVI-IDALMLNQIIANLVSNAIK 844
                 L++ L  + + FE +A+ K + FD+I       +   DAL  NQI+ NL+SNAIK
Sbjct: 722  IGLYNLADELGPLLRGFEASAQLKEIEFDVIWSPNSLLLANFDALRFNQIVTNLLSNAIK 781

Query: 845  FTEQGFVQLSLKQSPNDSESNLARYVIEVRDSGLGLNEQQKKAIFEPFVQVVSAPTST-R 903
            FT+QG V   +  +P           I V D+G G+ + Q +++F PF Q  S  T    
Sbjct: 782  FTDQGRVVFKIDVAPE-------MLTIVVEDTGCGMTQTQIESLFVPFAQADSTITRRFG 834

Query: 904  GTGLGLSICMRLAQLLEAQLSVDSQPDKGSSFKLQF------------------------ 939
            GTGLG+SI   L +L+  ++ V S+ ++G+  ++                          
Sbjct: 835  GTGLGMSIVANLIELMNGKIEVKSEFEQGTQIQVNLPLVTQTCDEFRGQVVAMSYRSPYM 894

Query: 940  -----------EAERTLPE---------------DVQESTQPQA-PAGMSL---NILVAE 969
                       E E  + +               +V   TQ Q  PA   L   ++LVA+
Sbjct: 895  LWAKALGMRVEENEEWVEQSGHNIYPDLLLNRLREVSNLTQAQTEPAHSRLLQGHVLVAD 954

Query: 970  DHAANRLLLCQQLEYLGHNAIPCDDGETALAQWQAADPPFDLTITDCNMPHMDGYELTRR 1029
            D A NRLL+ +QL  LG +A    DG  A  +       +DL ITDC+MPH+DG+ LTR+
Sbjct: 955  DDAINRLLIKKQLSELGLSATLVSDGLQAFEKLSQHPEQYDLLITDCHMPHLDGFALTRK 1014

Query: 1030 IRTLEQSRGLGLHPIFGLTANAQSHIIQDCLDAGMTQCLFKPIGI----EILAEQIYAVT 1085
            ++   Q   L    + G TA       +  L AGM + ++KP  +    ++L+  +    
Sbjct: 1015 VK---QEISLFKGAVVGCTAEDSRLAAEQALQAGMDKVIYKPYTLANLRKVLSRYLTTQW 1071

Query: 1086 AQIERQVKAASTTGGELEKLRILCPDAYSPLVEELINTNRQDAARLEQMLINNELKKISG 1145
              +  Q    +    E E++ ++  ++ +           QD A     L+N     +  
Sbjct: 1072 VALPEQSWLDAYQEEEREEMAMVVAESLA-----------QDIA-----LLNQPDCDVKA 1115

Query: 1146 LAHKIKGGAQLADARNLIEACMQLESLAHLDDANACEEQIKTVIQIMLSLEQELL 1200
            LAH+IKG A     + L +    +E         A ++Q+   +  ++   Q+ L
Sbjct: 1116 LAHRIKGAAGSLQLQRLADLAKTVEKQNDPQQLVADKQQLINAMHEVVEQAQQWL 1170