Pairwise Alignments

Query, 1203 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 1287 a.a., signal transduction histidine kinase-like protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  187 bits (476), Expect = 4e-51
 Identities = 142/476 (29%), Positives = 245/476 (51%), Gaps = 37/476 (7%)

Query: 582  KTLIDGSPIALYVRDKAGKLVHCNRAYLEFLQITHEDVLGKTLPDAEILPVSLSAQYDQI 641
            +T++D +  A+   D  G +   N +    L  T ++++G   P    L   +  +  Q+
Sbjct: 389  RTILDAASYAIIATDTEGIITVFNPSAERLLGFTAKEMVGLQTPAIFHLEEEVVRRATQL 448

Query: 642  YQNSEQGAEPAFADLEIEVQGQPHRIYHWTLPFQSSAG---------------EFSGVIG 686
             +      EP F     + +       +WT   +S A                +  G +G
Sbjct: 449  SEELGTKIEPGFDAFVAKSRRGKEDTNNWTYVSKSGARITVKLSVTTLYGEDKDIMGYLG 508

Query: 687  GWLDISEREQLVEQLRVAKQAADEANESKSIFLASMSHEIRTPISALIGLIEMLRVRGGT 746
               D++E+ +  ++L  A++ A +A+ +KS FLA+MSHEIRTP++A++GL++M  ++   
Sbjct: 509  IAYDLTEQLKREQELADAREQALQASRAKSDFLANMSHEIRTPMNAVLGLLQM-TLQTEL 567

Query: 747  PQQINDNLAVAHESAQSLLSLIGDILDLSKIEAGAMVLSPRPTRLSELLHSVHKLF--EI 804
            P +  D L    ++A+SLL+L+ DILD SKIEAG + L  +   L +LL  +  +   ++
Sbjct: 568  PPRPRDYLEKTQQAAKSLLALLNDILDFSKIEAGRIELERQGFSLQQLLGDMGSILSSQV 627

Query: 805  NARNKHLTFDLIIDVQDQHVIIDALMLNQIIANLVSNAIKFTEQGFVQLSLKQSPNDSES 864
              ++  L + +   V DQ +I D+L L QI+ N+++NAIKFTE+G +   +     D   
Sbjct: 628  QQKDIELVYQVAPSVPDQ-LIGDSLRLRQILLNVLTNAIKFTEKGDIITRIDADLGD--D 684

Query: 865  NLARYVIEVRDSGLGLNEQQKKAIFEPFVQVVSAPTST-RGTGLGLSICMRLAQLLEAQL 923
                  IE++DSG+G+  +Q+  IF+ F Q  S+ +    GTGLGL+I   L  L++ ++
Sbjct: 685  GTCHLHIEIQDSGIGMTNEQQAIIFKGFSQADSSISRRYGGTGLGLAITRELVHLMQGEI 744

Query: 924  SVDSQPDKGSSFKLQFEAERTLPEDVQ---ESTQPQAPAGMS-LNILVAEDHAANRLLLC 979
             V S P  GS+F +          DVQ   ++T+ +  A  S + +L+ ED+  +RL+  
Sbjct: 745  RVTSSPGVGSTFTI----------DVQLGFDATKYRPGARFSGVRVLLVEDNHTSRLVFS 794

Query: 980  QQLEYLGHNAIPCDDGETALAQWQAADP-PFDLTITDCNMPHMDGYELTRRIRTLE 1034
            + L  LG      ++G TA+   +   P  FD+ + D  +P +DG EL   IR L+
Sbjct: 795  ELLRDLGCEVTALNNGLTAMKTIERMAPDSFDVLLADWQLPGLDGLELASWIRHLD 850



 Score = 75.5 bits (184), Expect = 3e-17
 Identities = 54/155 (34%), Positives = 75/155 (48%), Gaps = 12/155 (7%)

Query: 955  PQAPAGMSLNILVAEDHAANRLLLCQQLEYLGHNAIPCDDGETALAQWQAADPPFDLTIT 1014
            P AP+ +   +L+ ED+A NRL+    L  LG   I   DG  AL         FDL + 
Sbjct: 916  PLAPSLVGRRLLLVEDNATNRLVATSLLGQLGAEVIEAVDGFQALKLLSRQQ--FDLVLM 973

Query: 1015 DCNMPHMDGYELTRRIRTLEQSRGLGLHPIFGLTANAQSHIIQDCLDAGMTQCLFKPIGI 1074
            D  MP MDGY+ TR+IR       L   PI  +TANA     Q C DAGM   + KP  I
Sbjct: 974  DIQMPGMDGYQTTRKIRNELMLTDL---PIIAMTANAMPEDKQACRDAGMNCHISKPFEI 1030

Query: 1075 EILAEQIYAVTAQIERQVKAA-------STTGGEL 1102
            + +A ++    +  E  ++++       ST+ G L
Sbjct: 1031 DEVATKLLQYLSPPEHPMRSSEALAEDESTSAGSL 1065