Pairwise Alignments

Query, 404 a.a., integrase from Pseudomonas simiae WCS417

Subject, 423 a.a., prophage P4 integrase from Klebsiella michiganensis M5al

 Score =  118 bits (295), Expect = 4e-31
 Identities = 100/418 (23%), Positives = 180/418 (43%), Gaps = 47/418 (11%)

Query: 1   MSKLNPKQV--ENLTEPGTYEDGDGLRLVVKPTGRKSWLLRFQLAGRRREMGLGSFPEVS 58
           + +LN +++  E + +     DG GL L++K  G   W LR++  G  R + LG +  + 
Sbjct: 12  LRELNARKLSGEIIEKDSRLSDGSGLYLLIKSNGSAYWRLRYRFNGEDRLISLGEYKYIP 71

Query: 59  LKKARQAASAKRSQLSDGIDPLAARDLERAAQREAERVSEAKKLKFETLATEYRDAHGAM 118
           L  AR+     +  ++ GIDP   +D             E   L F  +A ++  A    
Sbjct: 72  LALAREKREEVKRNIARGIDPRGTKD-------------EEGFLTFREVAMQWH-ASNRQ 117

Query: 119 WSEKWRKGWLRKLELYAFAHIGKLSAEDIGTPEVLKVLQPIW-ATKTRTADEVRGQIEQV 177
           WS++  +  L+ L    F   G  + + + T ++LK ++ +  + +   A  +  +I  V
Sbjct: 118 WSKEHSRRILKSLLDEVFPVFGDDNIKLLKTQDLLKPVKQVQDSGRLELASRIYQRINSV 177

Query: 178 LDAAKARNLREGENPARWRGHLDNLLSRAEKKKARKREHFEALRWQDVPDLMIKLR--AN 235
           +  A    L E    A   G L            R  EH  AL  +++P+ + ++     
Sbjct: 178 MTLAVDNGLLEFNPIAHKSGALIK----------RNSEHRAALELENIPEFLKRIEKFKG 227

Query: 236 STPPSWAAQLLIMTSARAHMVRFARWDEFDLEAGTWSLPGER------------MKMRVA 283
                 A   L+ T  R+  +RFARW EFDLE   W++P  R             KM+  
Sbjct: 228 RRLTQLAMTFLLHTFVRSSELRFARWKEFDLENSLWTIPSVREEIPGVKYSYRGSKMKTP 287

Query: 284 FVIPLAEEVVNLVKSIPRDEGS-AFLFPGQG-KTGVMHANAVRTLLHGIGYE---HITRH 338
            ++PL+ +  ++++ I    G   F+F         M  N +   L  +GY+    +  H
Sbjct: 288 HIVPLSHQACSIIQEIKSITGERIFVFTSDHFPKKPMSENTINHALQSMGYDTKKDLCSH 347

Query: 339 GFRSSFRDWAGECTHYPREVCEMALAHDERDQTEGAY-SRSDFLDKRRLLMNDWSKFI 395
           GFR+       E   + R+  E  ++H ER+    AY  +++ + +R+ +M  WS ++
Sbjct: 348 GFRTMACSALIESGKWSRDAIERQMSHQERNNVRAAYIHKAELIPERQKMMQWWSDYL 405