Pairwise Alignments

Query, 638 a.a., DNA mismatch repair protein from Pseudomonas simiae WCS417

Subject, 541 a.a., DNA mismatch repair protein from Synechococcus elongatus PCC 7942

 Score =  135 bits (340), Expect = 5e-36
 Identities = 109/340 (32%), Positives = 169/340 (49%), Gaps = 13/340 (3%)

Query: 22  QIAAGEVVERPASVIKELLENSIDSGAKRIDVDV--EQGGVKLLRVRDDGSGISSDDLPL 79
           ++AAGEV++  A+V++EL ENS+D+G +R+ +D+  EQ  V   RV DDG G+S ++L L
Sbjct: 17  RMAAGEVIDSLAAVVRELCENSLDAGTQRLVIDLWPEQWRV---RVADDGMGLSLENLQL 73

Query: 80  ALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRSAEQAWQVETEGRDM 139
           A   H +SK+    D      LGFRGEAL S++ + RLT+ SRT  A   WQ+  +    
Sbjct: 74  AALAHTSSKLSP--DRFTAEQLGFRGEALHSLARLGRLTIASRTADAAAGWQISYDIGGQ 131

Query: 140 APRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRLALARFDVAFHLR 199
                P A   G  VEV+ LF +   RR+   +   +   +Q+ I+ L LA   +   + 
Sbjct: 132 PQVATPIAIAPGCIVEVQQLFQDWLERRQSQPSPAQQLRAVQQQIQNLVLAHPSITVQVT 191

Query: 200 HNGKTILSLHEAHDDAARARRVSAICGPG-FLEQALPIEIERNGLRLWGWVGLP-TFSRS 257
            N +  L+    H    R  ++     P  +  Q+L +  E    +L   VGLP    R 
Sbjct: 192 QNDRPWLAFAPVHHPQERLLQLLPNTSPADWRSQSLDLGSEG---QLQVVVGLPDRCHRR 248

Query: 258 QADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEVDPSVVDVNVHPTKHE 317
           + D     VNGR VR   +  A+  A    L   R P      +V PS VD + HP K E
Sbjct: 249 RPDWVKVAVNGRVVRVSELEQAMIGALHRSLPRDRFPVVFAHLQVPPSQVDWHRHPAKAE 308

Query: 318 VRFRDGRMVHDFLYGTLHRTLGDVRPDDQLAAPIVTAVVR 357
           +  +D  +  + +   + +TL  + P +++  P  TA++R
Sbjct: 309 LFLQDLPVWCERIQEAIAQTL-PLDPAEEIELPASTALLR 347



 Score = 64.3 bits (155), Expect = 1e-14
 Identities = 54/186 (29%), Positives = 82/186 (44%), Gaps = 21/186 (11%)

Query: 451 ALAQLKGIYILAENAHGLVLVDMHAAHERIMYERLKIAMASEGLSGQPLLVPESLAVSQR 510
           A+AQ+   Y+LAE    L L++ H AHER+++E+L+          QP+L+   L++ QR
Sbjct: 364 AIAQVLNTYVLAEQGDSLWLIEQHIAHERVLFEQLQDDWQLVACQ-QPILL-SKLSLEQR 421

Query: 511 EADCAEEHHSVFQKLGFELQRLGPETLAIRQIPALLKQAEANRLVADVLADLMEYGTSDR 570
                        +LG   +  G +  AIR IPA L Q E      D++  L+E      
Sbjct: 422 ---------LQLDRLGITAEDFGEDLWAIRHIPAALAQRE------DLVEALLELSRGWD 466

Query: 571 IQAHINELLGTMACHGAIRANRRLALPEMNGLLRDMENTERSGQCNHGRPTWTQMGLDDL 630
           + A        +AC  AIR    L   E   L+   ++  +   C HGRP    +    L
Sbjct: 467 LSA----AQAAIACRTAIRNGTLLYPEEQQTLIDRWQHCRQPRTCPHGRPIALVLPETSL 522

Query: 631 DKLFLR 636
            + F R
Sbjct: 523 ARYFRR 528