Pairwise Alignments

Query, 638 a.a., DNA mismatch repair protein from Pseudomonas simiae WCS417

Subject, 629 a.a., DNA mismatch repair protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  461 bits (1186), Expect = e-134
 Identities = 284/648 (43%), Positives = 377/648 (58%), Gaps = 45/648 (6%)

Query: 12  IELLSPRLANQIAAGEVVERPASVIKELLENSIDSGAKRIDVDVEQGGVKLLRVRDDGSG 71
           I LL P L N+IAAGEVVERPAS +KEL+EN+ID+GA RID+ +  GG   + V DDG G
Sbjct: 3   IRLLPPVLVNRIAAGEVVERPASAVKELVENAIDAGASRIDITMTDGGRARILVVDDGRG 62

Query: 72  ISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRSAEQAWQ 131
           +   +L LA+ RHATSK+   +DL  + +LGFRGEAL SI SVARLTLTSR   A  AW 
Sbjct: 63  MDPGELSLAVERHATSKLPG-DDLLDIHTLGFRGEALPSIGSVARLTLTSRAAGAGDAWA 121

Query: 132 VETEGRDMAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRLALAR 191
           +  EG       +PA+HP GT VEVRDLF+ TPAR KFLKA +TE  H  +V+ RLA+A 
Sbjct: 122 LTVEGGAKG-EPEPASHPQGTRVEVRDLFYATPARLKFLKAPRTEQMHAVDVVHRLAMAH 180

Query: 192 FDVAFHLRHNGKTILSLHEAHDDAARAR--RVSAICGPGFLEQALPIEIERNGLRLWGWV 249
             V F L    +  + L  A  +   AR  R+ AI G  F + A+ IE ER G+RL G  
Sbjct: 181 PAVGFTLSDGTRQQIRLSGAQGELFEARLTRLGAILGREFSDNAIAIEAEREGIRLTGHA 240

Query: 250 GLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEVDPSVVDV 309
            LPT++++ +  QY FVNGR VRDKL+  AVR AY+DVL + R+    L+ ++ P +VDV
Sbjct: 241 ALPTYNKATSAGQYLFVNGRPVRDKLLHGAVRGAYQDVLAHDRNAVLALYLDLPPEMVDV 300

Query: 310 NVHPTKHEVRFRDGRMVHDFLYGTL--------HRT--------LGDVRPDDQLAAPIVT 353
           NVHP K EVRFRD  +V   + G L        HR         LG +RP     AP + 
Sbjct: 301 NVHPAKAEVRFRDPGLVRGLIIGALRHALAAAGHRASSTVSLAALGALRPAQGSGAPALP 360

Query: 354 AVVRPSGPQAGEFGPQGEMSLAANLLQSPQSQPS-YTAPNAGAGSGYQYQYTPRPQSAVP 412
                 G   G   P  E   +A   Q+P   P  +     GAG G              
Sbjct: 361 WGA--GGYGGGASHPGLEERRSAYAAQAPAGTPDPWAGRGMGAGGG-------------- 404

Query: 413 VAEAQAAYREFFAPLPGAEP---GAPVALPEGGGDIPPLGYALAQLKGIYILAENAHGLV 469
               QAA   + A  P A P   G P A P G  D P LG A  Q+   YI+A+   G+V
Sbjct: 405 --SGQAAMA-WLAGAPPAAPRLAGEPEAPPTGAEDFP-LGAARGQIHDTYIIAQTRDGVV 460

Query: 470 LVDMHAAHERIMYERLKIAMASEG-LSGQPLLVPESLAVSQREADCAEEHHSVFQKLGFE 528
           +VD HAAHER++ ER+K A+A  G ++ Q LL+PE + + +  A       +   KLG  
Sbjct: 461 IVDQHAAHERLVMERMKAALAERGEVARQILLLPEVVELDEPGAVRVATAAAELAKLGLV 520

Query: 529 LQRLGPETLAIRQIPALLKQAEANRLVADVLADLMEYGTSDRIQAHINELLGTMACHGAI 588
           ++  GP  + +R++PALL   +   LVAD+   L E+GT+  ++  + +++ TMACHG++
Sbjct: 521 VEGFGPGAVVVREVPALLGDTDVKGLVADLAEGLAEWGTAQALEDRLGDVVATMACHGSV 580

Query: 589 RANRRLALPEMNGLLRDMENTERSGQCNHGRPTWTQMGLDDLDKLFLR 636
           RA RRL + EMN LLRDME T R+GQCNHGRPT+ ++ L D+++LF R
Sbjct: 581 RAGRRLRIEEMNALLRDMERTPRAGQCNHGRPTYVELRLGDIERLFGR 628