Pairwise Alignments

Query, 638 a.a., DNA mismatch repair protein from Pseudomonas simiae WCS417

Subject, 631 a.a., DNA mismatch repair protein MutL (RefSeq) from Shewanella loihica PV-4

 Score =  400 bits (1028), Expect = e-116
 Identities = 245/583 (42%), Positives = 332/583 (56%), Gaps = 54/583 (9%)

Query: 12  IELLSPRLANQIAAGEVVERPASVIKELLENSIDSGAKRIDVDVEQGGVKLLRVRDDGSG 71
           I +L P+LANQIAAGEVVERPASVIKEL+ENS+D+GA R+D+++++GG KL+++ D+GSG
Sbjct: 3   IRILPPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIEIDKGGSKLIKITDNGSG 62

Query: 72  ISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRSAEQAWQ 131
           I  ++L LAL+RHATSK+  L+DL+ ++S GFRGEALASISSV+RLTLTSRT+   +AWQ
Sbjct: 63  IPKEELSLALSRHATSKLASLDDLDAILSFGFRGEALASISSVSRLTLTSRTQEQSEAWQ 122

Query: 132 VETEGRDMAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRLALAR 191
              EG +MA RV PAAHPVG++VE  DLFFNTPARR+FLK++KTEF H+ E +KR+AL R
Sbjct: 123 AYAEGSEMAVRVIPAAHPVGSTVEAADLFFNTPARRRFLKSDKTEFTHIDEWLKRIALVR 182

Query: 192 FDVAFHLRHNGKTILSLHEAHDDAARARRVSAICGPGFLEQALPIEIERNGLRLWGWVGL 251
            ++ F L+HNGK + +   A  +A   +R++ + G  F + AL ++   NGL L G++  
Sbjct: 183 SEIHFTLKHNGKQVRNYRPAKTEAQYLQRLAQVSGKAFADNALRVDCNHNGLSLSGYIQS 242

Query: 252 PTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEVDPSVVDVNV 311
           P    +  D QYF+VNGR VRD+LV HAVRQA+   L  G    FVL   +DP  VDVNV
Sbjct: 243 PFSEMAVGDTQYFYVNGRLVRDRLVNHAVRQAFAQQL-QGEQVAFVLMLNLDPHQVDVNV 301

Query: 312 HPTKHEVRFRDGRMVHDFLYGTLHRTLGDVRPDDQLA--APIVTAV---------VRPSG 360
           HP KHEVRF + R VHDF+   L   L   R   +LA  A + T V         +RP  
Sbjct: 302 HPAKHEVRFHESRYVHDFILQALESAL---RQSSELAFEAALDTQVTDQNRSASYIRPLQ 358

Query: 361 PQAGEFGP-----------------------QGEMSLAANLLQSPQSQPSYTAPNAGAGS 397
            Q  + G                        + E S  A   +  ++Q S        G 
Sbjct: 359 TQQSDTGSNQIAHGDTEENALWLANERPAYGEREASRQAGGQRVQETQMSSYGSGQSGGR 418

Query: 398 GYQYQYTPRPQSAVPVAEAQAAYREFFAPLPGAEPGAPVALPEGGGDIPPLGYALAQLKG 457
           G  Y  T  P  A   + AQ          PG    A  A       +PP+      L G
Sbjct: 419 GRSYASTELPSQAAVDSYAQ------LMTTPGVSSQANQA---DDSHLPPMPQV---LDG 466

Query: 458 IYILAENAHGLVLVDMHAAHERIMYERLKIAMASEGLSGQPLLVPESLAVSQREADCAEE 517
            Y L      L L+ +  A   +    ++ A    GL GQPLL+P S+ V +       E
Sbjct: 467 QYWLLVRGSELALLSLSCAAREVTRREIE-AKLDAGLIGQPLLMPVSVKVDEDWQQTLVE 525

Query: 518 HHSVFQKLGFELQ-RLGPETLAIRQIPALLKQAEANRLVADVL 559
              + +KLG EL  RLG   L I+++P  L+Q++   ++ + L
Sbjct: 526 RELLVRKLGLELTIRLG--QLIIKKVPPYLRQSQLASVIPEFL 566