Pairwise Alignments

Query, 473 a.a., N-acetylmuramoyl-L-alanine amidase from Pseudomonas simiae WCS417

Subject, 526 a.a., N-acetylmuramoyl-L-alanine amidase from Burkholderia phytofirmans PsJN

 Score =  280 bits (715), Expect = 1e-79
 Identities = 190/498 (38%), Positives = 252/498 (50%), Gaps = 99/498 (19%)

Query: 2   RFRALVAVVGVLLAAMTVNALA-ASQVKSVRLWRAPDNTRLVFDLSGPVQHSVFTLTAPD 60
           R + L A    L+  +    LA AS V  VR+W A D TR+  +   P+Q++   L  PD
Sbjct: 25  RRQILRAGASTLVLGLVAPRLAWASSVLGVRVWPARDYTRVTIESDQPLQNAQQLLQGPD 84

Query: 61  RLVIDINGATLAAPLK--VS--TANTP-ITAMRSAQRTPTDLRVVIDLKKVVTPKSFSLA 115
           RLV+D++G  L   LK  VS  T N P I+++R  Q  P  +R+V DLK  V P+ F+L 
Sbjct: 85  RLVVDLSGLDLDQALKDLVSKITPNDPQISSVRVGQYQPHVVRMVFDLKGSVKPQVFTLP 144

Query: 116 PNAQYGNRLVVDLFD---------------------NAADANPPPA-------------- 140
           P   Y  RLV DL+                      N  +A PPPA              
Sbjct: 145 PVGAYKYRLVFDLYPAVAPDPLMDLLAQTERKQQTFNEENAAPPPATLSGPGTTPPTADN 204

Query: 141 ----------------------PPPSVATVPAVPV--NPSQPQVKLPPPPPAPAGK---- 172
                                 PP  VA  PA P+   P+ P V + PP      K    
Sbjct: 205 SEAFFERYAQNGGSGSAPSVPRPPVRVAPTPAPPILGKPATPAVPVAPPTAIARNKGNSA 264

Query: 173 ---------------------------RDIIVVIDAGHGGEDPGASGSRGQHEKDVVLAI 205
                                      R + V ID GHGGEDPGA G  G +EK V L I
Sbjct: 265 STLGADDAGNDDTYAFTNPKSGKSNTVRLLTVAIDPGHGGEDPGAIGGSGTYEKHVALDI 324

Query: 206 ARELQRQINAMKGYRAELTRTGDYFIPLRGRTEIARKKGADLFVSIHADAAPSAAAFGAS 265
           A++L+ +I+A    RA +TR  D+F+PL  R + AR+ GADLFVSIHADA  +  A G+S
Sbjct: 325 AKKLRAKIDAQPNMRAMMTRDADFFVPLNVRVQKARRVGADLFVSIHADAFTTPDAKGSS 384

Query: 266 VFALSDRGATSETARWLADSENRSDLIGGAGNVSLDDKDKMLAGVLLDLSMTASLTSSLN 325
           VFALS+ GATS  ARW+A+ EN SD IGG   +++   D  +   L D+S TA +  S+ 
Sbjct: 385 VFALSEHGATSAAARWMANKENSSDEIGG---INIKSADATVNRALFDMSTTAQIRDSMR 441

Query: 326 VGQKVLSNIGRVTPLHKQRVEQAGFMVLKSPDIPSILVETGFISNSNEASKLATGSHQQA 385
            G  VL  IG +  LHK  VEQAGF VLK+PDIPSILVET FISN +E  +L   ++++ 
Sbjct: 442 YGNFVLKEIGGINKLHKGSVEQAGFAVLKAPDIPSILVETAFISNPDEERRLNDDAYREK 501

Query: 386 LARSISAGVRQFFQQNPP 403
           +A +I  G++++F  NPP
Sbjct: 502 MADAIMTGIKRYFAANPP 519