Pairwise Alignments

Query, 473 a.a., N-acetylmuramoyl-L-alanine amidase from Pseudomonas simiae WCS417

Subject, 463 a.a., cell wall hydrolase/autolysin (RefSeq) from Shewanella sp. ANA-3

 Score =  343 bits (881), Expect = 5e-99
 Identities = 203/465 (43%), Positives = 275/465 (59%), Gaps = 29/465 (6%)

Query: 13  LLAAMTVNALAASQVKSVRLWRAPDNTRLVFDLSGPVQHSVFTLTAPDRLVIDINGATLA 72
           L A   V A AA+Q++ VR+W AP++TR+VFDLS    ++ F+L  P+RLV+D+  A+  
Sbjct: 15  LCAFFAVAAHAANQLEGVRIWAAPESTRVVFDLSEAPNYTYFSLDGPNRLVVDLKKASTK 74

Query: 73  APLKVSTANTPITAMRSAQRTPT--DLRVVIDLKKVVTPKSFSLAPNAQYGNRLVVDLFD 130
             LK    N+ +       ++PT  DLR+VIDL K +    FSL   A YGNRLVVDL D
Sbjct: 75  LSLKNIDNNSKLVKGVRVSKSPTKGDLRLVIDLVKPLNANLFSLPETAPYGNRLVVDLED 134

Query: 131 NAADANPPPAPPPSVATVPAVPVNPSQPQVKLPPPPPAPAGKRDIIVVIDAGHGGEDPGA 190
                        + A V + PV       +           RDI+V IDAGHGG+DPG+
Sbjct: 135 KTLTT--------ATAVVSSTPVKTVTQSAQ---------SSRDIVVAIDAGHGGDDPGS 177

Query: 191 SGSRGQHEKDVVLAIARELQRQINAMKGYRAELTRTGDYFIPLRGRTEIARKKGADLFVS 250
            G  G +EK V L IA+ +  +IN   G RA + RTGDYF+ L  R+E+AR   ADL +S
Sbjct: 178 IGPSGVYEKKVALEIAKRVASKINDTPGMRAVMIRTGDYFVNLNKRSELARNSKADLLIS 237

Query: 251 IHADAAPSAAAFGASVFALSDRGATSETARWLADSENRSDLIGGAGNVSLD-DKDKMLAG 309
           IHADA  S    GASV+ LS R A SE  RWL   E  S+L+GGAG +  + D ++ LA 
Sbjct: 238 IHADAFTSPQPKGASVWVLSMRRANSEIGRWLEQKEKHSELLGGAGEIIQNTDNEQYLAM 297

Query: 310 VLLDLSMTASLTSSLNVGQKVLSNIGRVTPLHKQRVEQAGFMVLKSPDIPSILVETGFIS 369
            LLD+SM +S+    +V   +L ++G VT LHK R E A   VLKSPDIPSILVETGFIS
Sbjct: 298 TLLDMSMNSSMAIGHSVAGDILKDLGSVTELHKSRPESASLAVLKSPDIPSILVETGFIS 357

Query: 370 NSNEASKLATGSHQQALARSISAGVRQFFQQNPPPGTYIAWLRDSG--------KIAQGP 421
           N  E   L +  HQ+++A +I  GV ++F  NPP  T +A  R+SG        K + G 
Sbjct: 358 NPKEERLLNSSRHQESIATAIYKGVSRYFHNNPPADTLLA-KRNSGGTTASSSAKSSSGN 416

Query: 422 RDHRVQPGDTLAMLAVRFQVSAATLRSANNLKTDELKVGQVLTIP 466
             H+V  G++L+ +A R+QV  A+++ AN +KTD +++GQ L IP
Sbjct: 417 IKHKVSRGESLSAIAQRYQVPMASIKRANGMKTDVVQLGQTLVIP 461