Pairwise Alignments

Query, 449 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Pseudomonas simiae WCS417

Subject, 465 a.a., UDP-N-acetylmuramate (RefSeq) from Shewanella sp. ANA-3

 Score =  575 bits (1483), Expect = e-169
 Identities = 279/455 (61%), Positives = 340/455 (74%), Gaps = 6/455 (1%)

Query: 1   MHIHILGICGTFMGSMAVLAKELGHHVTGSDANVYPPMSTQLEAQGIELTQGYDPSQFDP 60
           MH+HILGICGTFMG +A+LA+  GH VTGSDANVYPPMSTQLE QGIEL QG+D SQ   
Sbjct: 1   MHVHILGICGTFMGGLALLARAKGHRVTGSDANVYPPMSTQLEEQGIELIQGFDQSQLGE 60

Query: 61  V---PDLVVIGNAMSRGNPAVEYVLNKGLPYVSGPQWLADHVLQGRWVLAVAGTHGKTTT 117
               PDLVVIGNAMSRGNP VE VLN G+PY SGPQ+LADH+L  RWVLAV+GTHGKT+T
Sbjct: 61  AGSYPDLVVIGNAMSRGNPCVEAVLNLGIPYTSGPQFLADHILPERWVLAVSGTHGKTST 120

Query: 118 SSMLAWVLEHAGMSPGFLIGGVPQNFSVSARLGDTPFFVIEADEYDSAFFDKRSKFVHYR 177
           SSMLAW+LE  G  PGFLIGGVPQNF VSARLG++ FFV+EADEYDSAFFDKRSKFVHY 
Sbjct: 121 SSMLAWILEDCGYQPGFLIGGVPQNFGVSARLGESAFFVVEADEYDSAFFDKRSKFVHYH 180

Query: 178 PRTAILNNLEFDHADIFPDLAAIERQFHHLVRTIPSEGLVIHPTTEPALQRVIEMGCWTP 237
           PRT ++NNLEFDHADIF DLAAI++QFHHL+RT+P +G VI P    A+++ I+MGCW+ 
Sbjct: 181 PRTLVINNLEFDHADIFADLAAIQKQFHHLIRTVPGQGKVIWPADSHAVKQTIDMGCWSE 240

Query: 238 VQ---TTGAGGQWQVKLLSDDGSTFEVLFEGQTQGIVEWDMTGQHNVANALVTLAAARHV 294
            +   T      W  K LSDD   FEV F+G++QG++EW + GQHN+ NAL+ +AAARHV
Sbjct: 241 QETFHTAEVTKGWHAKALSDDCHEFEVFFDGESQGVLEWALIGQHNIENALMAIAAARHV 300

Query: 295 GVVPSMGIAALSAFKSVKRRMEKVADVNGVTIYDDFAHHPTAIATTLDGLRKRVGDAPII 354
           GV PS  IAAL+ F   KRR+E +  V+GV++YDDFAHHPTAIATT+ G+R +VG + I 
Sbjct: 301 GVKPSAAIAALTRFVPPKRRLELLGTVHGVSVYDDFAHHPTAIATTIKGMRAKVGQSKIT 360

Query: 355 AIVEPRSNSMKLGAHRDGLPESVNDADQVVWYAPANLGWDLPAIAALCTVPSLVCDSIEG 414
            ++EPRSN+MK G H+D L  S+  AD+   Y    + W++        +P  V   I+ 
Sbjct: 361 IVLEPRSNTMKSGVHKDTLAHSMLQADEAFLYQADTIDWNMKEAMEAAVIPVTVLHQIDD 420

Query: 415 IIEHVKRLAKPGTHVVVMSNGGFGGLHGKLAEALK 449
           ++  V   AK G  +VVMSNGGFGGLH KL  AL+
Sbjct: 421 VVAKVSASAKVGDTIVVMSNGGFGGLHKKLLAALE 455