Pairwise Alignments

Query, 572 a.a., peptidase C13 from Pseudomonas simiae WCS417

Subject, 510 a.a., Uncharacterized protein conserved in bacteria from Phaeobacter inhibens DSM 17395

 Score =  182 bits (463), Expect = 2e-50
 Identities = 93/268 (34%), Positives = 149/268 (55%), Gaps = 2/268 (0%)

Query: 29  LPDGGRYRGDVVDGLLQGQGRVDYPNGSWYAGQFDKGQWHGQGEWHGSNGEVYKGQFQQG 88
           LP+G  Y GD VDG ++G+G   +PNGS Y G+F KG+  G G+   ++G  Y+G++  G
Sbjct: 67  LPNGYEYTGDWVDGEVRGRGVARFPNGSVYEGEFAKGKPEGAGKITFADGGTYEGEWSDG 126

Query: 89  LFDGQGSLTTA-GSHYVGGFKNGRRNGEGTLKE-GQMTYRGEFKDDQYSGLGRLELADGS 146
           + +GQG    A G+ Y GGF++ + +G+G ++  G   Y G++ D +  G G++   DG+
Sbjct: 127 VINGQGVAVYANGARYEGGFRDAKHHGKGVMRNPGGYEYDGDWVDGRKEGAGKITYPDGA 186

Query: 147 QYQGQFAHGKPNGEGQRNDDSGNQFSGHFVDGQLEGNGTFNSADGDIYVGQFKQNQLNGK 206
            Y+G+  +G+  G G+     G  + G +   Q++G G     +GDIY G     +  G+
Sbjct: 187 IYEGEIRNGQLEGTGKLIMPDGLVYEGDWAANQMDGTGALTQPNGDIYEGPLAAGRRQGE 246

Query: 207 GRYENADGDVWIGQFKEGALSGKGELIGVDGSHYVGQFSDWRFSGEGRLNLTDGSFYIGG 266
           G+  +A+GDV+IG F++    G+G     DG  Y G++   +  G+GR+   DGS Y G 
Sbjct: 247 GKQIHANGDVYIGNFEDDLRHGEGTFTKTDGYVYSGEWLAGQIEGKGRVTYPDGSVYEGQ 306

Query: 267 FDSDSYQGKGTLVLTDGTVQAGTWVNGM 294
           F  D   G G +   DG+   G WV G+
Sbjct: 307 FRDDLADGVGKITYPDGSTYEGDWVAGV 334



 Score =  164 bits (415), Expect = 8e-45
 Identities = 99/295 (33%), Positives = 147/295 (49%), Gaps = 7/295 (2%)

Query: 30  PDGGRYRGDVVDGLLQGQGRVDYPNGSWYAGQFDKGQWHGQGEWHGSNGEVYKGQFQQGL 89
           PDG  Y G++ +G L+G G++  P+G  Y G +   Q  G G     NG++Y+G    G 
Sbjct: 183 PDGAIYEGEIRNGQLEGTGKLIMPDGLVYEGDWAANQMDGTGALTQPNGDIYEGPLAAGR 242

Query: 90  FDGQGSLTTA-GSHYVGGFKNGRRNGEGTL-KEGQMTYRGEFKDDQYSGLGRLELADGSQ 147
             G+G    A G  Y+G F++  R+GEGT  K     Y GE+   Q  G GR+   DGS 
Sbjct: 243 RQGEGKQIHANGDVYIGNFEDDLRHGEGTFTKTDGYVYSGEWLAGQIEGKGRVTYPDGSV 302

Query: 148 YQGQFAHGKPNGEGQRNDDSGNQFSGHFVDGQLEGNGTFNSADGDIYVGQFKQNQLNGKG 207
           Y+GQF     +G G+     G+ + G +V G +EG GT    +G +Y G+FK  + +G+G
Sbjct: 303 YEGQFRDDLADGVGKITYPDGSTYEGDWVAGVIEGTGTTTYPNGLVYTGEFKNAKNHGQG 362

Query: 208 RYENADGDVWIGQFKEGALSGKGELIGVDGSHYVGQFSDWRFSGEGRLNLTDGSFYIGGF 267
                DG  + G +K+G   G   +   DGS Y G F++ +  G G++ +TDG  Y G +
Sbjct: 363 VMTYPDGYRYEGGWKDGQRDGDAVVTYPDGSVYTGSFANSQRHGTGKIVMTDGFSYEGDW 422

Query: 268 DSDSYQGKGTLVLTDGTVQAGTWVNGMR-----VRDADGKLLPDPLEIGVLAQGG 317
                 GKG     +G V  G+++N  R     +R A G+      E G L   G
Sbjct: 423 TEGKISGKGVATYANGDVYEGSFLNSKRQGPGVMRYASGQEAEGTWENGALKTTG 477



 Score =  164 bits (414), Expect = 1e-44
 Identities = 92/278 (33%), Positives = 146/278 (52%), Gaps = 4/278 (1%)

Query: 18  DGESLLPPDARLPDGGRYRGDVVDGLLQGQGRVDYPNGSWYAGQFDKGQWHGQGEWHGSN 77
           DGE      AR P+G  Y G+   G  +G G++ + +G  Y G++  G  +GQG    +N
Sbjct: 79  DGEVRGRGVARFPNGSVYEGEFAKGKPEGAGKITFADGGTYEGEWSDGVINGQGVAVYAN 138

Query: 78  GEVYKGQFQQGLFDGQGSLTTAGSH-YVGGFKNGRRNGEG--TLKEGQMTYRGEFKDDQY 134
           G  Y+G F+     G+G +   G + Y G + +GR+ G G  T  +G + Y GE ++ Q 
Sbjct: 139 GARYEGGFRDAKHHGKGVMRNPGGYEYDGDWVDGRKEGAGKITYPDGAI-YEGEIRNGQL 197

Query: 135 SGLGRLELADGSQYQGQFAHGKPNGEGQRNDDSGNQFSGHFVDGQLEGNGTFNSADGDIY 194
            G G+L + DG  Y+G +A  + +G G     +G+ + G    G+ +G G    A+GD+Y
Sbjct: 198 EGTGKLIMPDGLVYEGDWAANQMDGTGALTQPNGDIYEGPLAAGRRQGEGKQIHANGDVY 257

Query: 195 VGQFKQNQLNGKGRYENADGDVWIGQFKEGALSGKGELIGVDGSHYVGQFSDWRFSGEGR 254
           +G F+ +  +G+G +   DG V+ G++  G + GKG +   DGS Y GQF D    G G+
Sbjct: 258 IGNFEDDLRHGEGTFTKTDGYVYSGEWLAGQIEGKGRVTYPDGSVYEGQFRDDLADGVGK 317

Query: 255 LNLTDGSFYIGGFDSDSYQGKGTLVLTDGTVQAGTWVN 292
           +   DGS Y G + +   +G GT    +G V  G + N
Sbjct: 318 ITYPDGSTYEGDWVAGVIEGTGTTTYPNGLVYTGEFKN 355



 Score =  155 bits (393), Expect = 3e-42
 Identities = 106/313 (33%), Positives = 143/313 (45%), Gaps = 38/313 (12%)

Query: 5   APLALALLLTACG---------DGESLLPPDARLPDGGRYRGDVVDGLLQGQGRVDYPNG 55
           A L  AL L A G         DG+ L   D     GG Y G    GL  G G    PNG
Sbjct: 14  ALLTSALALGAAGGIRPALAQDDGKVLTTQDEI---GGIYEGTFRGGLQHGTGTYTLPNG 70

Query: 56  SWYAGQFDKGQWHGQGEWHGSNGEVYKGQFQQGLFDGQGSLTTAGSHYVGGFKNGRRNGE 115
             Y G +  G+  G+G     NG VY+G+F +G  +G G +T A     GG         
Sbjct: 71  YEYTGDWVDGEVRGRGVARFPNGSVYEGEFAKGKPEGAGKITFAD----GG--------- 117

Query: 116 GTLKEGQMTYRGEFKDDQYSGLGRLELADGSQYQGQFAHGKPNGEGQRNDDSGNQFSGHF 175
                   TY GE+ D   +G G    A+G++Y+G F   K +G+G   +  G ++ G +
Sbjct: 118 --------TYEGEWSDGVINGQGVAVYANGARYEGGFRDAKHHGKGVMRNPGGYEYDGDW 169

Query: 176 VDGQLEGNGTFNSADGDIYVGQFKQNQLNGKGRYENADGDVWIGQFKEGALSGKGELIGV 235
           VDG+ EG G     DG IY G+ +  QL G G+    DG V+ G +    + G G L   
Sbjct: 170 VDGRKEGAGKITYPDGAIYEGEIRNGQLEGTGKLIMPDGLVYEGDWAANQMDGTGALTQP 229

Query: 236 DGSHYVGQFSDWRFSGEGRLNLTDGSFYIGGFDSDSYQGKGTLVLTDGTVQAGTWVNGM- 294
           +G  Y G  +  R  GEG+    +G  YIG F+ D   G+GT   TDG V +G W+ G  
Sbjct: 230 NGDIYEGPLAAGRRQGEGKQIHANGDVYIGNFEDDLRHGEGTFTKTDGYVYSGEWLAGQI 289

Query: 295 ----RVRDADGKL 303
               RV   DG +
Sbjct: 290 EGKGRVTYPDGSV 302



 Score =  110 bits (276), Expect = 1e-28
 Identities = 65/197 (32%), Positives = 96/197 (48%), Gaps = 4/197 (2%)

Query: 30  PDGGRYRGDVVDGLLQGQGRVDYPNGSWYAGQFDKGQWHGQGEWHGSNGEVYKGQFQQGL 89
           PDG  Y G   D L  G G++ YP+GS Y G +  G   G G     NG VY G+F+   
Sbjct: 298 PDGSVYEGQFRDDLADGVGKITYPDGSTYEGDWVAGVIEGTGTTTYPNGLVYTGEFKNAK 357

Query: 90  FDGQGSLTTA-GSHYVGGFKNGRRNGEG--TLKEGQMTYRGEFKDDQYSGLGRLELADGS 146
             GQG +T   G  Y GG+K+G+R+G+   T  +G + Y G F + Q  G G++ + DG 
Sbjct: 358 NHGQGVMTYPDGYRYEGGWKDGQRDGDAVVTYPDGSV-YTGSFANSQRHGTGKIVMTDGF 416

Query: 147 QYQGQFAHGKPNGEGQRNDDSGNQFSGHFVDGQLEGNGTFNSADGDIYVGQFKQNQLNGK 206
            Y+G +  GK +G+G     +G+ + G F++ + +G G    A G    G ++   L   
Sbjct: 417 SYEGDWTEGKISGKGVATYANGDVYEGSFLNSKRQGPGVMRYASGQEAEGTWENGALKTT 476

Query: 207 GRYENADGDVWIGQFKE 223
           G       D    Q  E
Sbjct: 477 GGATQGSDDADADQATE 493



 Score =  103 bits (256), Expect = 2e-26
 Identities = 59/175 (33%), Positives = 86/175 (49%), Gaps = 2/175 (1%)

Query: 30  PDGGRYRGDVVDGLLQGQGRVDYPNGSWYAGQFDKGQWHGQGEWHGSNGEVYKGQFQQGL 89
           PDG  Y GD V G+++G G   YPNG  Y G+F   + HGQG     +G  Y+G ++ G 
Sbjct: 321 PDGSTYEGDWVAGVIEGTGTTTYPNGLVYTGEFKNAKNHGQGVMTYPDGYRYEGGWKDGQ 380

Query: 90  FDGQGSLTTA-GSHYVGGFKNGRRNGEGTL-KEGQMTYRGEFKDDQYSGLGRLELADGSQ 147
            DG   +T   GS Y G F N +R+G G +      +Y G++ + + SG G    A+G  
Sbjct: 381 RDGDAVVTYPDGSVYTGSFANSQRHGTGKIVMTDGFSYEGDWTEGKISGKGVATYANGDV 440

Query: 148 YQGQFAHGKPNGEGQRNDDSGNQFSGHFVDGQLEGNGTFNSADGDIYVGQFKQNQ 202
           Y+G F + K  G G     SG +  G + +G L+  G       D    Q  ++Q
Sbjct: 441 YEGSFLNSKRQGPGVMRYASGQEAEGTWENGALKTTGGATQGSDDADADQATEDQ 495



 Score = 43.1 bits (100), Expect = 3e-08
 Identities = 21/69 (30%), Positives = 32/69 (46%)

Query: 29  LPDGGRYRGDVVDGLLQGQGRVDYPNGSWYAGQFDKGQWHGQGEWHGSNGEVYKGQFQQG 88
           + DG  Y GD  +G + G+G   Y NG  Y G F   +  G G    ++G+  +G ++ G
Sbjct: 412 MTDGFSYEGDWTEGKISGKGVATYANGDVYEGSFLNSKRQGPGVMRYASGQEAEGTWENG 471

Query: 89  LFDGQGSLT 97
                G  T
Sbjct: 472 ALKTTGGAT 480