Pairwise Alignments

Query, 381 a.a., rod shape-determining protein RodA from Pseudomonas simiae WCS417

Subject, 370 a.a., cell wall shape-determining protein from Klebsiella michiganensis M5al

 Score =  397 bits (1021), Expect = e-115
 Identities = 189/366 (51%), Positives = 270/366 (73%), Gaps = 7/366 (1%)

Query: 18  RATLLQRMHIDGPLLILLLTLAAGSLFVLYSASGKNWDLLIKQASSFGLGLLSMVVIAQL 77
           + +L  ++H+D  +L++LL L   S  V++SASG++  ++ ++     +G++ M+V+AQ+
Sbjct: 7   KKSLWDKIHLDPTMLLILLALLTYSALVIWSASGQDMGMMERKIGQIAMGIVIMIVMAQI 66

Query: 78  EPRFMARWVPLGYVAGVLLLVVVDVMGHNAMGATRWINIPGVIRFQPSEFMKILMPATIA 137
            PR    W P  Y+  ++LLV VD  G  + GA RW+++ G++RFQPSE  KI +P  +A
Sbjct: 67  PPRVYEGWAPYLYIFCIILLVAVDAFGAISKGAQRWLDL-GIVRFQPSEIAKIAVPLMVA 125

Query: 138 WYLSKRTLPPQLKHVGISLILIGVPFILIVRQPDLGTSLLILAGGAFVLFMGGLRWRWI- 196
            ++++   PP LK+  I+L+LI +P +L+  QPDLGTS+L+   G FVLF+ GL WR I 
Sbjct: 126 RFINRDVCPPSLKNTAIALVLIFLPTLLVAAQPDLGTSILVALSGLFVLFLSGLSWRLIG 185

Query: 197 --LSVLAAAVPVAVAMWFFFMHDYQKQRILTFLDPESDPLGTGWNIIQSKAAIGSGGVFG 254
             + ++AA +P+   +WFF MHDYQ+QR++  LDPE+DPLG G++IIQSK AIGSGG+ G
Sbjct: 186 IAVVLVAAFIPI---LWFFLMHDYQRQRVMMLLDPETDPLGAGYHIIQSKIAIGSGGLRG 242

Query: 255 KGWLLGTQSHLDFLPESHTDFIIAVMGEEFGLVGICALLLIYLLLIGRGLVITAQAQTLF 314
           KGWL GTQS L+FLPE HTDFI AV+ EE GL+G+  LL +Y+LLI RGL I AQAQT F
Sbjct: 243 KGWLHGTQSQLEFLPERHTDFIFAVLAEELGLIGVLILLALYILLIMRGLWIAAQAQTTF 302

Query: 315 GKLLAGALTMTFFVYVFVNIGMVSGLLPVVGVPLPFISYGGTSLVTLLSAFGVLMSIHTH 374
           G+++AG L +  FVYVFVNIGMVSG+LPVVGVPLP +SYGG++L+ L++ FG++MSIHTH
Sbjct: 303 GRVMAGGLMLILFVYVFVNIGMVSGILPVVGVPLPLVSYGGSALIVLMAGFGIVMSIHTH 362

Query: 375 RKWIAQ 380
           RK +++
Sbjct: 363 RKMLSK 368