Pairwise Alignments

Query, 381 a.a., rod shape-determining protein RodA from Pseudomonas simiae WCS417

Subject, 367 a.a., rod shape-determining protein RodA (RefSeq) from Shewanella sp. ANA-3

 Score =  412 bits (1059), Expect = e-120
 Identities = 198/361 (54%), Positives = 269/361 (74%), Gaps = 1/361 (0%)

Query: 18  RATLLQRMHIDGPLLILLLTLAAGSLFVLYSASGKNWDLLIKQASSFGLGLLSMVVIAQL 77
           R  + QRMHID PLL+ L  +    LFV+YSASG++  ++ +Q     L L  M  +AQ+
Sbjct: 6   RQNIWQRMHIDLPLLLGLFAVMGFGLFVIYSASGEDLGMMERQLFRMFLSLGIMFTMAQI 65

Query: 78  EPRFMARWVPLGYVAGVLLLVVVDVMGHNAMGATRWINIPGVIRFQPSEFMKILMPATIA 137
            P  + RW    Y+AG++LL+ V   G    GA RW+N+ G + FQPSE +K+  P T+A
Sbjct: 66  NPEALKRWALPIYLAGIVLLLGVHFFGEINKGAQRWLNL-GFMEFQPSELIKLAFPITMA 124

Query: 138 WYLSKRTLPPQLKHVGISLILIGVPFILIVRQPDLGTSLLILAGGAFVLFMGGLRWRWIL 197
           WY+SK  LPP+ +++  + +++ VP +LI +QPDLGTS+L+ A G FVLF+ G+ W  + 
Sbjct: 125 WYISKFPLPPKKRYLAGAAVILLVPTLLIAKQPDLGTSILVAASGIFVLFLSGMSWAIVG 184

Query: 198 SVLAAAVPVAVAMWFFFMHDYQKQRILTFLDPESDPLGTGWNIIQSKAAIGSGGVFGKGW 257
             +AA +     +W+F MHDYQ+ R++T LDPE DPLG G++IIQSK AIGSGG++GKGW
Sbjct: 185 GFIAAVLAFLPILWYFLMHDYQRTRVMTLLDPEKDPLGAGYHIIQSKIAIGSGGLWGKGW 244

Query: 258 LLGTQSHLDFLPESHTDFIIAVMGEEFGLVGICALLLIYLLLIGRGLVITAQAQTLFGKL 317
           L GTQS L+F+PE HTDFI AV+GEEFGL+G   LLL+YL +IGRGLVI ++AQT F +L
Sbjct: 245 LDGTQSQLEFIPERHTDFIFAVIGEEFGLIGSIILLLMYLYIIGRGLVIASRAQTSFARL 304

Query: 318 LAGALTMTFFVYVFVNIGMVSGLLPVVGVPLPFISYGGTSLVTLLSAFGVLMSIHTHRKW 377
           LAG++T+TFFVYVFVNIGMVSG+LPVVGVPLP +SYGGTS++TL++ FG+LMSIHTHR++
Sbjct: 305 LAGSITLTFFVYVFVNIGMVSGILPVVGVPLPLVSYGGTSMLTLMTGFGILMSIHTHRRF 364

Query: 378 I 378
           +
Sbjct: 365 V 365