Pairwise Alignments

Query, 385 a.a., D-alanyl-D-alanine carboxypeptidase from Pseudomonas simiae WCS417

Subject, 391 a.a., penicillin-binding protein 6 (RefSeq) from Shewanella sp. ANA-3

 Score =  342 bits (876), Expect = 1e-98
 Identities = 186/390 (47%), Positives = 251/390 (64%), Gaps = 5/390 (1%)

Query: 1   MNITTLAKRTCLLLSLIITPAAWAVEMV-PASPQLAAKSWVLMDAASGNVLVESNGDQRL 59
           MN      +T LL+S +  P   A  +V P +P +AAK++VLMD  SG ++ E N  + L
Sbjct: 2   MNFVKSPIKTLLLISSVSLPVYAAQPIVTPDAPTVAAKAYVLMDYYSGQIIAEENAYESL 61

Query: 60  PPASLTKLMTAYIATLEIRRGQIGENDPVTVSENAWR---TGGSRMFIKVGSQVTVSDLL 116
            PASLTK+MT+Y+   EI+ G +  +D VT+S+NAW    +  S+MFI+VG  V VSDL 
Sbjct: 62  NPASLTKMMTSYVIGQEIKAGNVSPDDDVTISKNAWSKNFSDSSKMFIEVGKTVKVSDLN 121

Query: 117 HGIIIQSGNDASVALAEHIAGSEDAFADMMNKTVADLGMTNSHFMNPTGLPNPEHYSSAH 176
            GIIIQSGNDA VA+AEHIAG+E AF DMMN     LGM +S+F N  GL +  H S+A+
Sbjct: 122 RGIIIQSGNDACVAMAEHIAGTEGAFVDMMNSWAKQLGMRDSYFENSHGLDSENHKSTAY 181

Query: 177 DMAILARAIIRVDPVHYAIYSQKEFFWNNIKQPNRNLLLWRDK-TVDGLKTGHTDEAGYC 235
           DMA+L  A+IR  P  Y +YS+K + +N IKQ NRN LLW +   VDG+KTGHT  AGY 
Sbjct: 182 DMALLGAALIRDVPEEYRVYSEKYYTFNGIKQYNRNGLLWDNSMNVDGIKTGHTSGAGYN 241

Query: 236 MVSSAVRDGQRLIAVVFGTNSEQARAAETQKLLTYGFRFFETQTFYQKGAELATAPVWKG 295
           +V+SA +DG RLI+VV GT SE AR AE++KLLTYGFRFFET T Y+ G    T  +W G
Sbjct: 242 LVASATKDGMRLISVVMGTQSEAARKAESKKLLTYGFRFFETVTPYKAGDSFVTQQIWYG 301

Query: 296 ATSQVKAGLADDLTLTMPKGQLKKLAASMTMNPQLVAPIAKGDVIGKVEVKLDDKVVHSA 355
             S V  G+A D  +T+ +G+ K L A+  +   L AP+ KG+ +G++  +LD K +   
Sbjct: 302 DKSTVDLGVATDTPITISRGRAKDLKANFELTKPLDAPLKKGETVGRLYFQLDGKDIAQF 361

Query: 356 DLIALDAVDEGGIFRRVWDSIRLFFYSLFN 385
            L+ L  V+EG  F ++ D  +  F   F+
Sbjct: 362 PLVTLQEVNEGSWFSKLVDYFKQLFSGWFS 391