Pairwise Alignments

Query, 441 a.a., murein transglycosylase from Pseudomonas simiae WCS417

Subject, 323 a.a., lytic murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

 Score =  236 bits (603), Expect = 6e-67
 Identities = 129/318 (40%), Positives = 193/318 (60%), Gaps = 3/318 (0%)

Query: 50  AVVAPLAVDNLDIQPTQTFAEWQAGFRVQALQAGITAAVFDNAFANVTPDMAVIRADRSQ 109
           ++V  LA+    +    +F ++    + QA + GI+  + + AF +V      + AD++Q
Sbjct: 6   SIVLGLALSAPVLANEVSFEQYVERLKQQAREEGISERILNEAFRDVEYKPRSVVADKNQ 65

Query: 110 PEFSRPVWEYLDGALSPLRVRNGQSLLIKYADILQSIEQRYGVDRQALVSVWGMESNFGQ 169
           PE    + EY+  A+   +V+  QSL  K+   LQ I ++YGV  + +V++WG+ESNFG 
Sbjct: 66  PEKKLTLDEYIPRAVPEWKVKQAQSLYEKHYTELQRIGKQYGVQPRFIVALWGVESNFGA 125

Query: 170 FQGNNSVIRSLATLAYEGRRPAFAQAQLLAALQIIQHGDIQADQMKGSWAGAMGQTQFIP 229
           F GN  VI +L+TLAYEGRR  F + + +AALQI++ G I  + MKGSWAGAMGQ QF+P
Sbjct: 126 FTGNFRVIDALSTLAYEGRREEFFRKETMAALQILEQGHIAPEAMKGSWAGAMGQCQFMP 185

Query: 230 TTYNTHAVDFDGDGRRDIWNSPADALASTAHYLQSSGWQKGQPWGFEVKQLPANFDYALA 289
           +++   A D +GDG++DIW + +D  ASTA+YL  SGW     WG +VK +P  FD+AL 
Sbjct: 186 SSFLNFAADGNGDGKKDIWGTRSDVFASTANYLSQSGWDDKYTWGRQVK-IPKGFDHALE 244

Query: 290 DGGIR--KTVAEWLKLGIQLPPGATLPPNVDQLSAALLLPAGYRGPAFLVLDNFRAILKY 347
                  KT+ EW KLG+    G  LP   D + A L++P    G  +LV +N+  ++K+
Sbjct: 245 GRQPEKGKTLQEWSKLGVTRYDGKPLPALSDDIKAWLIMPDDEAGRIYLVYNNYNVLMKW 304

Query: 348 NNSSSYALAVGLLSERFA 365
           N S  +ALAV  L++R A
Sbjct: 305 NRSHYFALAVSHLADRIA 322