Pairwise Alignments

Query, 184 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 466 a.a., Alginate biosynthesis protein AlgK precursor from Pseudomonas fluorescens FW300-N2E2

 Score = 50.8 bits (120), Expect = 3e-11
 Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 9/143 (6%)

Query: 46  SQAEALSACQKQADGGDAQAQYELGEYFHDSKNPARDLNKALSYFEKASLQGHAQAQFEL 105
           + A+A  A  + A G +  A Y LG+ +           KAL +  KA+  G   A F +
Sbjct: 323 ADAKAAEAHFQNAVGREVAADYYLGQIYRRGYLGQVYSQKALDHLLKAARNGQNSADFAI 382

Query: 106 GNMFFKGEGVPANNVQAYIVLKMAAVNGAEDALDTADEVAEHMQRDELEVATQVL--GQI 163
             +F +G+G   N V AY+  ++A       A++ A  +   +   +L  A ++L   Q 
Sbjct: 383 AQLFSQGKGTKPNPVNAYVFSQLAKAQNTPQAIELAQTLEAQLPPQQLAQAQRLLQQEQA 442

Query: 164 FRN-------YLQELQSADGRSP 179
            R         LQ L+  DG  P
Sbjct: 443 IRGAMSPDTLELQALKEDDGEEP 465



 Score = 30.4 bits (67), Expect = 5e-05
 Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 3/85 (3%)

Query: 55  QKQADGGDAQAQYELGEYFHDSKNPARDLNKALSYFEKASLQGHAQAQFELGNMFFKGEG 114
           Q+ AD G ++AQ  L +   DS++P +      +Y   A +   AQA+  LG +     G
Sbjct: 49  QQLADLGYSEAQVGLADIQVDSRDPEQMRKAEATYRAAADISPRAQAR--LGRLLVAKPG 106

Query: 115 -VPANNVQAYIVLKMAAVNGAEDAL 138
              A   +A  +LK A  NG  + L
Sbjct: 107 STEAEKHEAEGLLKKAFANGEGNTL 131



 Score = 29.6 bits (65), Expect = 8e-05
 Identities = 11/37 (29%), Positives = 22/37 (59%)

Query: 82  DLNKALSYFEKASLQGHAQAQFELGNMFFKGEGVPAN 118
           D++K + Y E        +A+  LG ++++G+ VPA+
Sbjct: 288 DVDKMMQYLENGRAADQPRAELLLGKLYYEGKWVPAD 324