Pairwise Alignments

Query, 204 a.a., putative transporter, required for glycine utilization (from data) from Pseudomonas simiae WCS417

Subject, 217 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  219 bits (559), Expect = 2e-62
 Identities = 106/203 (52%), Positives = 144/203 (70%)

Query: 2   LLMLYLIAITAEAMTGALSAGRRGMDWFGVVLIACVTALGGGSVRDVLLGHYPLTWVKHP 61
           + +L+LI I AEAMTGAL AGR+ MD FGVV+I C TA+GGG++RD+LLG+YPL WV++ 
Sbjct: 7   ITLLWLIGILAEAMTGALCAGRKQMDLFGVVIIGCATAIGGGTLRDILLGNYPLIWVENI 66

Query: 62  EYLVLTSIAALVTIFIAPLMRRLRSLFLALDAVGLVAFTLIGCMTALEMGHGMLVASVSG 121
            YL+  + A+L+T+ I+P+MR L  LFLA+DA+GL  F+++G    L +G    +A V G
Sbjct: 67  HYLLAIAFASLLTVIISPVMRYLSKLFLAIDALGLAVFSIVGAQKTLLLGFSPTLAIVMG 126

Query: 122 VITGVFGGILRDIFCNDIPLIFRRELYASVSFLAAWFYMLCLYLELPSEQAILLTLFSGF 181
           V+TGVFGG++RDI CN +PLIF++ELYA VS   A  YML    E+     + ++L  GF
Sbjct: 127 VVTGVFGGVIRDILCNQVPLIFKKELYALVSLTTASLYMLLRSFEVTEWINLAISLSVGF 186

Query: 182 LLRLLAIRFHWEMPKFVYNDDVH 204
             R+LAIR+HW MPKF Y    H
Sbjct: 187 SFRMLAIRYHWGMPKFDYQHGDH 209