Pairwise Alignments

Query, 204 a.a., putative transporter, required for glycine utilization (from data) from Pseudomonas simiae WCS417

Subject, 209 a.a., trimeric intracellular cation channel family protein from Methanococcus maripaludis S2

 Score = 95.1 bits (235), Expect = 8e-25
 Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 4/200 (2%)

Query: 1   MLLMLYLIAITAEAMTGALSAGRRGMDWFGVVLIACVTALGGGSVRDVLLGHYPLTWVKH 60
           +  ++ +I + A A+ GAL   ++G+D  G++++  +TALGGG  RD+L+   P   ++ 
Sbjct: 6   IFFIMNIIGLLAFAVVGALKGIKKGLDLLGIIVLGIMTALGGGITRDLLVNTIPYA-LRS 64

Query: 61  PEYLVLTSIAALVTIFIAPLMRRLRS---LFLALDAVGLVAFTLIGCMTALEMGHGMLVA 117
           P  + +  I     I I  +     S   +    DAVGL AFT  G M A          
Sbjct: 65  PNDMGVALIGVWCAIVIFKVFNEDVSNKYIIQIPDAVGLSAFTTTGAMIAYNFDVSFFGI 124

Query: 118 SVSGVITGVFGGILRDIFCNDIPLIFRRELYASVSFLAAWFYMLCLYLELPSEQAILLTL 177
            +   +TGV GGI+ DI     P     + YAS S + A  + L +   L  E + ++  
Sbjct: 125 IILATLTGVGGGIISDILLQKTPSALTEDFYASCSIIGAIAFYLAILSNLSLEMSAVICS 184

Query: 178 FSGFLLRLLAIRFHWEMPKF 197
               ++R++AI   W +PKF
Sbjct: 185 IVVLMIRIVAILCKWSLPKF 204



 Score = 50.4 bits (119), Expect = 2e-11
 Identities = 22/72 (30%), Positives = 40/72 (55%)

Query: 86  SLFLALDAVGLVAFTLIGCMTALEMGHGMLVASVSGVITGVFGGILRDIFCNDIPLIFRR 145
           ++F  ++ +GL+AF ++G +  ++ G  +L   V G++T + GGI RD+  N IP   R 
Sbjct: 5   NIFFIMNIIGLLAFAVVGALKGIKKGLDLLGIIVLGIMTALGGGITRDLLVNTIPYALRS 64

Query: 146 ELYASVSFLAAW 157
                V+ +  W
Sbjct: 65  PNDMGVALIGVW 76