Pairwise Alignments

Query, 796 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 924 a.a., Sensor histidine kinase/response regulator from Pseudomonas fluorescens FW300-N1B4

 Score =  217 bits (552), Expect = 3e-60
 Identities = 232/777 (29%), Positives = 343/777 (44%), Gaps = 69/777 (8%)

Query: 31  GRAIQVLEDPTDALTIADVSAPSATPQFKPHDKDTLNAGYSRSVFWLKVNLHYLPTQAEA 90
           G    VL D    L ++D+ +   T QF P + D L A       WL+  L      A  
Sbjct: 28  GSGWAVLLDEQGDLQLSDIRSSRYTNQFSPIELDHLTAAAPDGALWLRFKL------APG 81

Query: 91  QRTWLLELAYPPLDHLDLYLPDSSGTYRLAGRTGDALPFSAREIRQNNYLFKVDFA---P 147
           +   LL +  P L HL+LY+ D            D L     +++    L   DF    P
Sbjct: 82  KHEQLLRVFAPDLVHLNLYVLDGDQLI-------DQLNTGTAQLQAKPPLPSSDFMLPLP 134

Query: 148 GEAKT--VYLRLQSEGSIQAPLTLWSS--TAYLEQQPLRLYVLGLIYGVLLGMLVYNLFI 203
              KT  VYLRL SE   +  +TL S+  TA  + Q L   + GL++G L  ++++NL  
Sbjct: 135 QSDKTLDVYLRLVSEHQFRPYITLQSAVMTAATQYQTL---IYGLLFGCLGMLILHNLTR 191

Query: 204 YLSVRDTSYLYYIFYIASFGMYQLSVNGAAVEYFWPNNPWWANAATP---FLIGSAALFG 260
           YL  R  S L+     A  G+  LS+    +    P  P W+   TP     +   A  G
Sbjct: 192 YLYTRSRSSLWLA---ACEGLLMLSLV-LLLNLARPWLPNWSVVQTPGAYLALLMTAPCG 247

Query: 261 SLFA-RSFLHTAQHSRWINRLLLALVACGGVVMLLSLMTSYALALRLAT-GLALVFTVTI 318
            +FA R F     H   +N+LLL  +    V  LL L  +  L L L T GL  +  +++
Sbjct: 248 LMFAYRFFAPLGPHP--LNKLLLGNILFIMVCGLLLLFVN-TLPLNLITYGLVALAGLSM 304

Query: 319 FVAAIKAWYCGQRVARYFIIAWSAFLLGGVVNTLMVLGYLPNVFLTMYASQ-------IG 371
              +   W  G R AR F+ A   F LG    TL++L  L    LT+ A Q       + 
Sbjct: 305 LFVSAHHWQKGYRPARLFVAAMVVFNLG----TLIILPALQG--LTLVAPQSLIIILLVF 358

Query: 372 SAIEVALLSLALADRINSMREQQAQILFDASQKLEVLNQQLARSNRLKDEFLATLTHELR 431
             I   L+S+AL +R  S+ E +    F  S+ L   N ++      K EFLA ++HE+R
Sbjct: 359 ICISGLLMSIALGERQRSITEDR----FSVSRDLAASNAEI----NAKAEFLAKISHEIR 410

Query: 432 TPMNGVIGSLELMQTVPLDADLAQYHQTAAGSARDMMRMVNGILTLTELQAGRLSAQPQV 491
           TPMNGV+G  EL+   PL      Y QT   +  +++ ++N IL +++L++G++      
Sbjct: 411 TPMNGVLGMTELLLGTPLSVKQRDYVQTIHSAGNELLTLINEILDISKLESGQIELDDVQ 470

Query: 492 FSLRGTLDTLRQQFTANAQSKGLAFSIDVADELPDRVLGDADKLLQSLDCLLDNAFKFTH 551
           F L   ++     F A A+ + +     +  ++P  + GD  +L Q+L  LL+NA K T 
Sbjct: 471 FDLNALIEDCLSIFRAKAEQQNVELISFIQPQVPRVISGDPTRLRQTLLSLLENALKKTD 530

Query: 552 EGSVRLRVVGVPQSDGGLRLSFIVTDTGIGF-AFLDEATLYQRFFQLDGSTTREYGGLGI 610
           EG + L VV + +     RL   V D+G    A   +A ++         +    GG  +
Sbjct: 531 EGEI-LIVVALDERSAKPRLRIAVQDSGQPMEAEERDALMHAELHSKHFLSATSLGG-NL 588

Query: 611 GLAICRQLIELLGGRLTHHSEPRKGSRFQLELEVSPVASDSKPAPDRQRAPQECSVLLVD 670
           GL I RQLI L+ G     S   +GS   L L + P   +  P  D     Q   VL+VD
Sbjct: 589 GLVIARQLIRLMQGEFGIKSGANQGSTLWLTLPLDPDRLE-HPTSDLDGPLQGARVLVVD 647

Query: 671 DNSVGQLVVRGMLLKLGYRVKTVDTGPNALAALQA-----GDFDAVLLD--IP-EGGFSL 722
           DN   + V+       G  V  V +G  ALA L+        FD VLLD  +P   G  L
Sbjct: 648 DNDTCRKVLVQQCSAWGMNVSAVPSGKEALALLRTKAHLRDYFDVVLLDQNMPGMTGMQL 707

Query: 723 CCQIRALPGCG-ELPVIALSTSLNVSERERCHGIGVSEHLVKPVRFEALQAVLERRL 778
             +I+  P    ++ +I L+   N   +      G+   L KPV    L+  L   L
Sbjct: 708 AAKIKEDPSLNHDILLIMLTGISNAPSKIIARNCGIKRILAKPVAGYTLKTTLADEL 764



 Score = 69.7 bits (169), Expect = 7e-16
 Identities = 41/123 (33%), Positives = 64/123 (52%), Gaps = 6/123 (4%)

Query: 659 RAPQECSVLLVDDNSVGQLVVRGMLLKLGYRVKTVDTGPNALAALQAGDFDAVLLDIPE- 717
           + P +  +L+ +DNS+   V+RGML KL  +  T   G  AL A++A  +D VL+D    
Sbjct: 786 KVPSDFRILVAEDNSISTKVIRGMLGKLNLQPDTASNGEEALVAMKAQRYDLVLMDCEMP 845

Query: 718 --GGFSLCCQIRALPGCGE---LPVIALSTSLNVSERERCHGIGVSEHLVKPVRFEALQA 772
              GFS   Q+RA     +    PV+AL+  +    +ER    G+  H+ KPV    L+ 
Sbjct: 846 ILDGFSATQQLRAWEVGNQRIRTPVVALTAHILAEHKERARQAGMDGHMAKPVELSQLRD 905

Query: 773 VLE 775
           ++E
Sbjct: 906 LIE 908