Pairwise Alignments

Query, 796 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 857 a.a., autoinducer 2 sensor kinase/phosphatase LuxQ from Vibrio cholerae E7946 ATCC 55056

 Score =  177 bits (449), Expect = 2e-48
 Identities = 119/391 (30%), Positives = 194/391 (49%), Gaps = 9/391 (2%)

Query: 393 QQAQILFDASQKLEVLNQQLARSNRLKDEFLATLTHELRTPMNGVIGSLELMQTVPLDAD 452
           Q    + +A ++ +   ++   S R++ EFLA ++HELRTP+NGV+G  +L++  PL+ +
Sbjct: 454 QDITTIAEAEKQSQAARREAEESARVRAEFLAKMSHELRTPLNGVLGVSQLLKRTPLNDE 513

Query: 453 LAQYHQTAAGSARDMMRMVNGILTLTELQAGRLSAQPQVFSLRGTLDTLRQQFTANAQSK 512
             ++      S   ++ ++N IL  + L+ G+   Q   F L+  +  + + +      K
Sbjct: 514 QREHVAVLCSSGEHLLAVLNDILDFSRLEQGKFRIQKNEFRLKELVCAIDRIYRPLCNEK 573

Query: 513 GLAFSIDVADELPDRVLGDADKLLQSLDCLLDNAFKFTHEGSVRLRVVGVPQSDGGLRLS 572
           GL   ++        V  D  ++ Q L  LL+NA KFTH+GS+R+ +  + + D   +L 
Sbjct: 574 GLELVVNSNITTAAIVRSDQIRINQILFNLLNNAIKFTHQGSIRVELQLI-EGDPLAQLV 632

Query: 573 FIVTDTGIGFAFLDEATLYQRFFQLDGSTTREYGGLGIGLAICRQLIELLGGRLTHHSEP 632
             V DTGIG    D   +++ F Q + +TTREYGG G+GL I   L+E+L G+L   SE 
Sbjct: 633 IQVVDTGIGIREQDLTVIFEPFMQAESTTTREYGGSGLGLTIVHSLVEMLSGQLHVSSEY 692

Query: 633 RKGSRFQLELEVSPVASDSK-----PAPDRQRA-PQECSVLLVDDNSVGQLVVRGMLLKL 686
             G+RF+++L +  V          PAPD Q    +   VLLV+DN     + +    K 
Sbjct: 693 GIGTRFEIQLPIELVEKPDAPQQLLPAPDPQPLFDKTLRVLLVEDNHTNAFIAQAFCRKY 752

Query: 687 GYRVKTVDTGPNALAALQAGDFDAVLLDIPEGGFSLCCQIRALPGCGELPVIALSTSLNV 746
           G  V  V  G  A+  L+  D+D VL+D            R +     LPV+  + + + 
Sbjct: 753 GLDVSWVTDGLQAIEELKIHDYDLVLMDNQLPYLDGVETTRTIKKVLHLPVVVYACTADG 812

Query: 747 SE--RERCHGIGVSEHLVKPVRFEALQAVLE 775
            E  R+     G    LVKP++ + L   LE
Sbjct: 813 LEETRQAFFHAGAEYVLVKPLKEQTLHKALE 843