Pairwise Alignments

Query, 211 a.a., pseudouridine synthase from Pseudomonas simiae WCS417

Subject, 241 a.a., 23S rRNA pseudouridine synthase E from Vibrio cholerae E7946 ATCC 55056

 Score =  241 bits (615), Expect = 8e-69
 Identities = 114/179 (63%), Positives = 134/179 (74%)

Query: 29  PAEPKLILFNKPFDVLTQFSDEGGRATLKDFIAIPGIYPAGRLDRDSEGLLLLTNDGQLQ 88
           PAE K+ILFNKP+D L+QF+D  GR TL D+I I  +Y AGRLDRDSEGLL+LTNDG LQ
Sbjct: 61  PAERKVILFNKPYDTLSQFTDGDGRKTLADYIPIKDVYAAGRLDRDSEGLLILTNDGILQ 120

Query: 89  ARIADPKHKLAKTYWVQVEGEPTEEQLQRLRDGVELNDGKTLPAQARQLDEPQLWPRNPP 148
           AR+  P+ K  KTYWVQVEG P E  L+ LR GV L DG TLPA+   + EP LWPRNPP
Sbjct: 121 ARLTQPQSKAPKTYWVQVEGSPQESDLEALRHGVTLKDGPTLPAKVDIMPEPTLWPRNPP 180

Query: 149 VRFRKNIPTYWLELVIREGRNRQVRRMTAAVGLPTLRLVRVRIGDWTIDGLDQGQWKEV 207
           VRFR  IPT WL + + EGRNRQVRRMTA +G PTLRL+R  +GDW +  L  G+W+EV
Sbjct: 181 VRFRAAIPTTWLAITLMEGRNRQVRRMTAHIGFPTLRLIRYSMGDWNLGDLQPGEWREV 239