Pairwise Alignments

Query, 211 a.a., pseudouridine synthase from Pseudomonas simiae WCS417

Subject, 182 a.a., pseudouridine synthase (RefSeq) from Shewanella loihica PV-4

 Score =  129 bits (323), Expect = 4e-35
 Identities = 79/177 (44%), Positives = 108/177 (61%), Gaps = 10/177 (5%)

Query: 39  KPFDVLTQFSDEGGRAT--LKDFIAIP-GIYPAGRLDRDSEGLLLLTNDGQLQARIADPK 95
           KP+  L+QF  E  +    L +    P GI   GRLD DSEGLLLLT DG+    +    
Sbjct: 4   KPYGYLSQFVGERRKRKPLLGELANFPTGIMAIGRLDHDSEGLLLLTTDGKTSHAVRSKS 63

Query: 96  HKLAKTYWVQVEGEPTEEQLQRLRDGVELN----DGKTLPAQARQLDE-PQLWPRNPPVR 150
             + K Y++Q++GE TE+ +  L +GVE+       +TLP +AR+LD+ P L PR   +R
Sbjct: 64  --IEKEYYLQLDGEITEQAISSLCEGVEIGIKGEKYRTLPCRARRLDQAPDLPPRGRKIR 121

Query: 151 FRKNIPTYWLELVIREGRNRQVRRMTAAVGLPTLRLVRVRIGDWTIDGLDQGQWKEV 207
             ++ PT WL + I EG+NRQ+R+MTAAVG  TLRLVRVRIGD  +  L  G+ K +
Sbjct: 122 DARHGPTSWLAITITEGKNRQLRKMTAAVGFATLRLVRVRIGDIRLGTLQPGEVKSL 178