Pairwise Alignments

Query, 836 a.a., ATP-dependent helicase from Pseudomonas simiae WCS417

Subject, 838 a.a., ATP-dependent helicase HrpB (RefSeq) from Shewanella amazonensis SB2B

 Score =  610 bits (1573), Expect = e-178
 Identities = 369/841 (43%), Positives = 504/841 (59%), Gaps = 41/841 (4%)

Query: 1   MNSLPIDEVLPALRDALANRHEAVLEAPPGAGKTTRVPLALLNEPWLAGQTILMLEPRRL 60
           +N+LP+ ++   L+ +LA   + +LEAP GAGK+T +PLALL+ P ++G+ I+MLEPRR+
Sbjct: 3   LNALPVCDLFDELKRSLAQHQQLILEAPTGAGKSTALPLALLDWPEISGR-IIMLEPRRV 61

Query: 61  AARAAAERLASELGEKVGETVGYRIRLDSKVGPNTRIEVVTEGILTRRLQDDPALDGVGL 120
           AAR+ A  +A + G ++G  VGYR+R DSKV   TR+EVVTEGILTR +QDDP LDGVGL
Sbjct: 62  AARSVARFIAKQRGCQLGAEVGYRVRGDSKVSKETRLEVVTEGILTRMIQDDPELDGVGL 121

Query: 121 LIFDEFHERSLDADLALALSLNGRELFRDDQPLKILLMSATLEGERLAGLLDNAPILRSE 180
           +IFDE HER L  DL LAL+L  +   RDD  L IL MSATL G  L  L+ +A +LRSE
Sbjct: 122 IIFDEIHERHLSTDLGLALALEVQAGLRDD--LNILAMSATLSGMPLEALMPDAVLLRSE 179

Query: 181 GRMFPVQMRWGRPYQPGEFIEPRVVQTVLDALQDET--------GSVLVFLPGQAEIRRV 232
           GR FPV + +      G   +  + +T+++    +         G+VL FLPG+AEI R+
Sbjct: 180 GRSFPVAVEYAS-VPAGADWQAHMGKTLMELATGKRPLPEGITPGTVLAFLPGKAEIERL 238

Query: 233 NQQLADALGERADVVLCPLHGELDLNAQRAAIDPAPVGKRKVVLATNIAETSLTINGVRV 292
              LA+ L E ++  +CPL+GELD N Q  A+   P G+RK+VLATN+AE+SLTI+GV +
Sbjct: 239 KDYLAERLSE-SEFAICPLYGELDANTQDRALSADPDGRRKLVLATNVAESSLTIDGVTL 297

Query: 293 VIDAGLARVPRFDPGSGMTRLDTQRISRASATQRAGRAGRLEPGVCYRLWSEDQHEGLAA 352
           V+D G  R   F+P +G+TRL  +RIS+ASA QRAGRAGRL PG+C RLWS+D+ E    
Sbjct: 298 VVDCGFVRQASFNPRTGVTRLGLKRISQASAIQRAGRAGRLAPGLCIRLWSQDEFERQVK 357

Query: 353 YGSAEILAADLAGLALQLARWGVTP-TQLVWLDVPPTAAYAQAQDLLGRLGALDE-EKLT 410
               EIL ++L  LA + A WG      L  L  PP    + A  LL  L  +D+  KLT
Sbjct: 358 ADEPEILRSELVSLAQEAAVWGARDFAALKLLSRPPKVNESLAWALLKDLELVDDNHKLT 417

Query: 411 AHGQKMAELPAHPRIAHLLLRGQALG-------LAATACDVAALLGERDILRGGGADLHS 463
           A G+    L  HPR+ H+LL+ +ALG       LA  AC +AA+L  R + R G    H 
Sbjct: 418 ALGRDAHRLGCHPRLGHMLLKARALGEAQSDATLAPLACLLAAILEGRGLPRRGCDISHY 477

Query: 464 RLALLSGEERARGTQGGVQRAKQLARQYRGYLRGQAT-QPVADPDHPRWLGALLALAYPD 522
                SG+              Q A+Q+   L  +A    VA   HPR  G LLALAYPD
Sbjct: 478 LGWATSGQ------------TGQQAKQWAAKLGIKADFAAVAKAAHPRDCGLLLALAYPD 525

Query: 523 RVAQQRRPGGAEYRLANGRAALFAEADSLMKQAWLVIADLGSRQGQREERIYLAADFDPA 582
           R+A  R   G  + LANG      E+D++  +  LV AD G  +G+   R++L A  D  
Sbjct: 526 RIAMARGKDG--FVLANGTGITVDESDAMALEPMLVAADFGELEGRSAGRLWLGAMLDAR 583

Query: 583 LFDTVLAEQVRNVDQLDWDEREGVLRAERQRKVGELVLSREPLTGLDESARSQALVNLVR 642
           LFD  LA      +   +DE  G   AE+QR VG LVL RE ++ +  + ++ A +  +R
Sbjct: 584 LFDGPLAFLQSEREVSGFDEGRGRFVAEKQRVVGSLVLGRETVSQVPAALKASAWIARIR 643

Query: 643 RKGLELLPWTPELRQWQARVMLLRQLDAGKTSEWPDLSDKALLASLEHWLMPYLGKVSRL 702
           +KGL  L    +  Q + RV L   L  G   +WP + D+ALL  LE WL PYLG ++ L
Sbjct: 644 QKGLACLGLDDDAMQLRRRVSLAANLLGG---DWPAMDDEALLDGLEDWLGPYLGNINSL 700

Query: 703 SHFANLDISSFLHNLLPWPLPQRLDELAPQHVKVPSGSSVRLDYSEQ-PPILAVRLQELF 761
           + F  LD    L + L W L + LDE  P H  + +G+   + Y +    +L VRLQE +
Sbjct: 701 NEFNKLDAGRLLRDSLDWQLRRTLDEALPTHYPMATGTQAPIRYEDDGRAMLRVRLQEAY 760

Query: 762 GLADTPRIASGRVAVKLHLLSPARRPVQVTQDLANFWRSTYAEVKKDLKGRYPKHYWPDD 821
           G+A TP +A GR+ + + LLSPA+RP+ +T DLA+FW+  Y +VKK+++GRYPKH WPDD
Sbjct: 761 GMAATPLLAGGRLKLTMELLSPAQRPLALTADLASFWQGPYQDVKKEMRGRYPKHLWPDD 820

Query: 822 P 822
           P
Sbjct: 821 P 821