Pairwise Alignments

Query, 298 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 301 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  104 bits (259), Expect = 3e-27
 Identities = 86/283 (30%), Positives = 135/283 (47%), Gaps = 17/283 (6%)

Query: 17  ALYVIWGSTYLVIRIGVEYWPPLLLAGIRFCTAGALMYGFLRWRGVPAPT-WPQWKAAGM 75
           AL  +WG++Y  I+IGVE  PP+ L   R   AG ++   + WRG+  P     W+    
Sbjct: 15  ALATLWGASYTFIKIGVETIPPVTLIAARTLIAGTVLLALIAWRGLTLPRDGAMWRRFLF 74

Query: 76  IGLLLLTVGNGGVSVAEHMGVSSGVAALAVATVPLFTLLCGYFWGARN--TRLEWAGVIL 133
              L   V    ++ +E     +GVAA+  +T P+F  L           T  ++ GV+ 
Sbjct: 75  QACLNSVVPFTLIAWSERT-TDAGVAAILNSTTPIFAFLLTALITRHEPVTARKFLGVLA 133

Query: 134 GIIGIAMLN-----MGSTLQSSPMGAVLLLVAAASWA--FGSVWSRQLPLPQGAMASAAE 186
           GI GI ++       G   Q  P  AV+L     + A  FG  +    P     M  A  
Sbjct: 134 GIAGIGLIIGLEAFRGIGDQLIPQLAVVLATVCYAGAAIFGKGFRGLDP-----MMPACG 188

Query: 187 MLVAGVALLMVSALSGERLQAVPPL-EGWLALAYLTVFGSIIAFNAYMYLLKHVRPAAAT 245
            L+AG ALL+ ++L  +R   + P  E  +AL  L+VF + +AF  Y  L+  +    AT
Sbjct: 189 SLLAGAALLIPASLVVDRPWTLDPSPESLIALLCLSVFSTALAFVIYFRLIHTLGSVGAT 248

Query: 246 SYAYVNPAVAVLLGIVFVGETIGLEEALAMLVIISAVLLISLP 288
           + AYV   + V +G+VF+GET+     L +  +I+ V  +++P
Sbjct: 249 AQAYVRVPIGVAIGVVFLGETLSTTAWLGLGCVIAGVAAMTMP 291



 Score = 24.6 bits (52), Expect = 0.003
 Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 5/84 (5%)

Query: 75  MIGLLLLTVGNGGVSVAEHMGV-----SSGVAALAVATVPLFTLLCGYFWGARNTRLEWA 129
           +I LL L+V +  ++   +  +     S G  A A   VP+   +   F G   +   W 
Sbjct: 217 LIALLCLSVFSTALAFVIYFRLIHTLGSVGATAQAYVRVPIGVAIGVVFLGETLSTTAWL 276

Query: 130 GVILGIIGIAMLNMGSTLQSSPMG 153
           G+   I G+A + M +  + + +G
Sbjct: 277 GLGCVIAGVAAMTMPTRPRVATVG 300