Pairwise Alignments

Query, 298 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 311 a.a., multidrug DMT transporter permease from Burkholderia phytofirmans PsJN

 Score = 91.7 bits (226), Expect = 2e-23
 Identities = 76/299 (25%), Positives = 141/299 (47%), Gaps = 26/299 (8%)

Query: 12  IAAFFALYVIWGSTYLVIRIGVEYWPPLLLAGIRFCTAGALMYGFLRWRGVPAPTWPQWK 71
           I     L  IWG   + I+      PP+  AG+R   A  L++ + R RG P      ++
Sbjct: 17  ILLMVGLCAIWGLQQVAIKSTNAAVPPVFQAGLRSAIASVLVWVWARSRGTPL-----FR 71

Query: 72  AAGMIGL-LLLTVGNGGVSVAEHMGV---SSGVAALAVATVPLFTLLCGYFW---GARNT 124
             G +G  LL  V   G  V   +G+   S+   A+ + T P FT L G  W   G R  
Sbjct: 72  DDGTLGAGLLAGVLFAGEFVCIFLGLTLTSASRMAVFLYTAPCFTAL-GLHWFVDGERMR 130

Query: 125 RLEWAGVILGIIGIAML---------NMGSTLQSSPMGAVLLLVAAASWAFGSVWSRQLP 175
           R++WAG+++   GI++            G +L +   G  L ++   +WA  +V  R   
Sbjct: 131 RIQWAGIVVAFAGISLAFADGFLHGPATGGSLLAGVAGDALGVLGGITWAATTVVVRATR 190

Query: 176 LPQGAMASAA--EMLVAGVALLMVS-ALSGERLQAVPPLEGWLALAYLTVFGSIIAFNAY 232
           L Q + +     +++V+ V LL ++  L    ++ V PL   ++LAY  V  + +++  +
Sbjct: 191 LAQSSASKTLFYQLMVSAVVLLALALGLGQAHVETVTPLT-VVSLAYQAVIVAFVSYLLW 249

Query: 233 MYLLKHVRPAAATSYAYVNPAVAVLLGIVFVGETIGLEEALAMLVIISAVLLISLPQWR 291
            +LL     +  + ++++ P   V  G++ +GE+  L   +A +++++ + L++ P  R
Sbjct: 250 FWLLTRYIASRLSVFSFLTPLFGVTFGVLLLGESFSLRFLMAAVLVLTGIALVNAPAKR 308